AT1G12450

Description : SNARE associated Golgi protein family

Gene families : OG0004066 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004066_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G12450
Cluster	HCCA: Cluster_66

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00069p00201370	evm_27.TU.AmTr_v1...	No description available	0.12	OrthoFinder output from all 47 species
Nbi_g11724	No alias	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Sam_g04657	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc01g102530.3.1	Solyc01g102530	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
CC	GO:0016020	membrane	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0009555	pollen development	IEP	HCCA
BP	GO:0048229	gametophyte development	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR032816	SNARE_assoc	121	241

External Links

No external refs found!