AT1G12380


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G62870.1); Has 173 Blast hits to 170 proteins in 34 species: Archae - 0; Bacteria - 4; Metazoa - 25; Fungi - 8; Plants - 123; Viruses - 7; Other Eukaryotes - 6 (source: NCBI BLink).


Gene families : OG0003515 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003515_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G12380

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00078570 No alias No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00181p00038780 evm_27.TU.AmTr_v1... No description available 0.01 OrthoFinder output from all 47 species
Aspi01Gene13693.t1 Aspi01Gene13693 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g17561 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09242 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01004906001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01018521001 No alias No description available 0.05 OrthoFinder output from all 47 species
LOC_Os02g25230.1 LOC_Os02g25230 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os04g19140.1 LOC_Os04g19140 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ppi_g03249 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g079550.1.1 Solyc08g079550 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source
BP GO:0001708 cell fate specification IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004888 transmembrane signaling receptor activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0009553 embryo sac development IEP HCCA
BP GO:0009556 microsporogenesis IEP HCCA
BP GO:0009566 fertilization IEP HCCA
BP GO:0009567 double fertilization forming a zygote and endosperm IEP HCCA
BP GO:0009900 dehiscence IEP HCCA
BP GO:0010025 wax biosynthetic process IEP HCCA
BP GO:0010047 fruit dehiscence IEP HCCA
BP GO:0010166 wax metabolic process IEP HCCA
CC GO:0010169 thioglucosidase complex IEP HCCA
MF GO:0010180 thioglucosidase binding IEP HCCA
BP GO:0010234 anther wall tapetum cell fate specification IEP HCCA
BP GO:0012501 programmed cell death IEP HCCA
MF GO:0016411 acylglycerol O-acyltransferase activity IEP HCCA
MF GO:0019199 transmembrane receptor protein kinase activity IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0034293 sexual sporulation IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
BP GO:0043934 sporulation IEP HCCA
MF GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity IEP HCCA
BP GO:0048236 plant-type sporogenesis IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051321 meiotic cell cycle IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0080051 cutin transport IEP HCCA
BP GO:0080172 petal epidermis patterning IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901568 fatty acid derivative metabolic process IEP HCCA
BP GO:1901570 fatty acid derivative biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007021 DUF659 302 422
No external refs found!