AT1G12220 (RPS5)

Aliases : RPS5

Description : Disease resistance protein (CC-NBS-LRR class) family

Gene families : OG0000196 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000196_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G12220

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00005p00238210	evm_27.TU.AmTr_v1...	Probable disease resistance protein At4g14610...	0.02	OrthoFinder output from all 47 species
AMTR_s00009p00126150	RPS5,...	Disease resistance protein RPS5 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
AMTR_s00019p00088510	evm_27.TU.AmTr_v1...	No description available	0.05	OrthoFinder output from all 47 species
AMTR_s00050p00210650	evm_27.TU.AmTr_v1...	Putative disease resistance protein At1g63350...	0.04	OrthoFinder output from all 47 species
AMTR_s00071p00163290	evm_27.TU.AmTr_v1...	Probable disease resistance protein At4g27220...	0.03	OrthoFinder output from all 47 species
AMTR_s00071p00163330	evm_27.TU.AmTr_v1...	Probable disease resistance protein At5g63020...	0.04	OrthoFinder output from all 47 species
AMTR_s00078p00177570	RPS2,...	Disease resistance protein RPS2 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AMTR_s00101p00133980	RFL1,...	Disease resistance protein RFL1 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AMTR_s00121p00125720	evm_27.TU.AmTr_v1...	Probable disease resistance protein At1g61180...	0.02	OrthoFinder output from all 47 species
AMTR_s00142p00041790	RPS2,...	Disease resistance protein RPS2 OS=Arabidopsis thaliana	0.07	OrthoFinder output from all 47 species
AT1G12210	RFL1	RPS5-like 1	0.07	OrthoFinder output from all 47 species
AT1G12280	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.08	OrthoFinder output from all 47 species
AT1G12290	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.06	OrthoFinder output from all 47 species
AT1G61180	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.1	OrthoFinder output from all 47 species
AT1G61310	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.08	OrthoFinder output from all 47 species
AT1G63360	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT4G26090	RPS2	NB-ARC domain-containing disease resistance protein	0.06	OrthoFinder output from all 47 species
AT5G05400	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.04	OrthoFinder output from all 47 species
AT5G43730	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.09	OrthoFinder output from all 47 species
AT5G43740	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.05	OrthoFinder output from all 47 species
AT5G47250	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.06	OrthoFinder output from all 47 species
AT5G47260	No alias	ATP binding;GTP binding;nucleotide...	0.06	OrthoFinder output from all 47 species
Adi_g074819	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g082458	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g31822	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aob_g32394	No alias	not classified & original description: none	0.08	OrthoFinder output from all 47 species
GSVIVT01014161001	No alias	Disease resistance protein At4g27190 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
GSVIVT01014595001	No alias	Disease resistance protein At4g27190 OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
GSVIVT01015167001	RPS2	Disease resistance protein RPS2 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01017020001	No alias	Probable disease resistance protein At5g63020...	0.04	OrthoFinder output from all 47 species
GSVIVT01017232001	No alias	Disease resistance protein SUMM2 OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
GSVIVT01020286001	No alias	Probable disease resistance protein At5g63020...	0.05	OrthoFinder output from all 47 species
GSVIVT01034252001	No alias	Probable disease resistance protein At1g61300...	0.05	OrthoFinder output from all 47 species
GSVIVT01038404001	No alias	Probable disease resistance protein At1g12290...	0.06	OrthoFinder output from all 47 species
Gb_12853	RPS2	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.07	OrthoFinder output from all 47 species
Gb_12854	RPS2	Disease resistance protein SUMM2 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
Gb_16713	RPS2	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.05	OrthoFinder output from all 47 species
Gb_26475	RPS5	Putative disease resistance protein RGA3 OS=Solanum...	0.05	OrthoFinder output from all 47 species
LOC_Os01g57870.1	RPS2, LOC_Os01g57870	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.05	OrthoFinder output from all 47 species
LOC_Os01g58530.1	RFL1, LOC_Os01g58530	Disease resistance protein SUMM2 OS=Arabidopsis thaliana...	0.07	OrthoFinder output from all 47 species
LOC_Os01g72680.1	RPS5, LOC_Os01g72680	Disease resistance protein RPS5 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_10265639g0010	No alias	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
MA_10274199g0010	RFL1	Disease resistance protein RFL1 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
MA_10352957g0010	No alias	Probable disease resistance protein At5g43730...	0.03	OrthoFinder output from all 47 species
MA_10426937g0010	No alias	Probable disease resistance protein At5g63020...	0.03	OrthoFinder output from all 47 species
MA_104304g0010	No alias	Disease resistance protein SUMM2 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_10432804g0010	No alias	Putative disease resistance protein At4g10780...	0.03	OrthoFinder output from all 47 species
MA_10435822g0010	RPS2	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_10436071g0020	RPS5	Probable disease resistance protein At4g27220...	0.06	OrthoFinder output from all 47 species
MA_10436967g0010	RPS5	Disease resistance protein RPS5 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
MA_23524g0010	No alias	Disease resistance protein RPS5 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_2485847g0010	No alias	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
MA_259247g0030	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
MA_31174g0010	No alias	Probable disease resistance protein At1g61190...	0.03	OrthoFinder output from all 47 species
MA_355252g0010	RPS2	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_421862g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_5216516g0010	No alias	Probable disease resistance protein At5g63020...	0.05	OrthoFinder output from all 47 species
MA_5270774g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_77943g0010	No alias	Putative disease resistance protein At4g10780...	0.04	OrthoFinder output from all 47 species
MA_7833161g0010	No alias	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
MA_837862g0010	No alias	Probable disease resistance protein At5g63020...	0.03	OrthoFinder output from all 47 species
MA_8647889g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_8869735g0010	No alias	Probable disease resistance protein At1g61300...	0.04	OrthoFinder output from all 47 species
Pir_g48677	RPS5	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pp3c3_1460V3.1	Pp3c3_1460	Disease resistance protein (CC-NBS-LRR class) family	0.02	OrthoFinder output from all 47 species
Solyc08g013970.3.1	Solyc08g013970	Probable disease resistance protein At4g27220...	0.02	OrthoFinder output from all 47 species
Solyc10g076440.1.1	Solyc10g076440	Disease resistance protein At4g27190 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IMP	Interproscan
BP	GO:0002376	immune system process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	ISS	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0006497	protein lipidation	None	Extended
BP	GO:0006498	N-terminal protein lipidation	None	Extended
BP	GO:0006499	N-terminal protein myristoylation	IDA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	IMP	Interproscan
BP	GO:0006952	defense response	TAS	Interproscan
BP	GO:0006955	immune response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008219	cell death	IMP	Interproscan
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009626	plant-type hypersensitive response	IMP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0012501	programmed cell death	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0018377	protein myristoylation	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0031365	N-terminal protein amino acid modification	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034050	programmed cell death induced by symbiont	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0038023	signaling receptor activity	IMP	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043543	protein acylation	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044403	biological process involved in symbiotic interaction	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0045087	innate immune response	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051702	biological process involved in interaction with symbiont	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004683	calmodulin-dependent protein kinase activity	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
MF	GO:0019902	phosphatase binding	IEP	HCCA
MF	GO:0019903	protein phosphatase binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001611	Leu-rich_rpt	541	597
IPR002182	NB-ARC	161	402

External Links

No external refs found!

AT1G12220 (RPS5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation