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  5. AT1G11960

AT1G11960


Description : ERD (early-responsive to dehydration stress) family protein


Gene families : OG0000264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000264_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G11960

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00143150 evm_27.TU.AmTr_v1... Solute transport.channels.OSCA calcium-permeable channel 0.03 OrthoFinder output from all 47 species
Aev_g09198 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09676 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g16435 HYP1, ATHYP1 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g27992 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g51209 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g11705 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene00231.t1 ERD4, Aspi01Gene00231 calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene57219.t1 Aspi01Gene57219 calcium-permeable channel *(OSCA) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene63971.t1 ERD4, Aspi01Gene63971 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0373.g067190 ERD4 calcium-permeable channel *(OSCA) & original... 0.03 OrthoFinder output from all 47 species
Cba_g26928 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.21G053600.1 ERD4, Ceric.21G053600 calcium-permeable channel *(OSCA) & original... 0.05 OrthoFinder output from all 47 species
Cre08.g360500 No alias CSC1-like protein At1g62320 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g21426 No alias calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g40944 No alias calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g12509 No alias calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26256 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g28230 ERD4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012666001 No alias Solute transport.channels.OSCA calcium-permeable channel 0.08 OrthoFinder output from all 47 species
Gb_08557 ERD4 calcium-permeable channel (OSCA) 0.04 OrthoFinder output from all 47 species
LOC_Os05g51630.1 LOC_Os05g51630 calcium-permeable channel (OSCA) 0.06 OrthoFinder output from all 47 species
LOC_Os07g05570.1 ERD4, LOC_Os07g05570 calcium-permeable channel (OSCA) 0.04 OrthoFinder output from all 47 species
LOC_Os12g39320.1 HYP1, ATHYP1,... calcium-permeable channel (OSCA) 0.05 OrthoFinder output from all 47 species
Len_g15514 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g24317 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32668 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Mp8g07950.1 ERD4 calcium-permeable channel (OSCA) 0.04 OrthoFinder output from all 47 species
Msp_g15893 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g13770 No alias calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14172 ERD4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g17063 No alias calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g21616 No alias calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03204 HYP1, ATHYP1 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012943 ERD4 calcium-permeable channel *(OSCA) & original... 0.05 OrthoFinder output from all 47 species
Smo41460 ERD4 Solute transport.channels.OSCA calcium-permeable channel 0.03 OrthoFinder output from all 47 species
Solyc09g064810.4.1 Solyc09g064810 calcium-permeable channel (OSCA) 0.05 OrthoFinder output from all 47 species
Zm00001e002499_P001 Zm00001e002499 calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species
Zm00001e020766_P002 Zm00001e020766 calcium-permeable channel (OSCA) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005576 extracellular region ISM Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004675 transmembrane receptor protein serine/threonine kinase activity IEP HCCA
MF GO:0004888 transmembrane signaling receptor activity IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006665 sphingolipid metabolic process IEP HCCA
BP GO:0006970 response to osmotic stress IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
BP GO:0009409 response to cold IEP HCCA
BP GO:0009644 response to high light intensity IEP HCCA
BP GO:0009651 response to salt stress IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010286 heat acclimation IEP HCCA
BP GO:0010555 response to mannitol IEP HCCA
BP GO:0010959 regulation of metal ion transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0019199 transmembrane receptor protein kinase activity IEP HCCA
BP GO:0030148 sphingolipid biosynthetic process IEP HCCA
BP GO:0032879 regulation of localization IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0043266 regulation of potassium ion transport IEP HCCA
BP GO:0043269 regulation of monoatomic ion transport IEP HCCA
MF GO:0045140 inositol phosphoceramide synthase activity IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0050801 monoatomic ion homeostasis IEP HCCA
BP GO:0051049 regulation of transport IEP HCCA
BP GO:0051365 cellular response to potassium ion starvation IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055075 potassium ion homeostasis IEP HCCA
BP GO:0055080 monoatomic cation homeostasis IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
InterPro domains Description Start Stop
IPR027815 CSC1/OSCA1-like_cyt 200 362
IPR032880 Csc1/OSCA1-like_N 7 179
IPR003864 CSC1/OSCA1-like_7TM 373 645
No external refs found!