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  5. AT1G11810

AT1G11810


Description : F-box associated ubiquitination effector family protein


Gene families : OG0001907 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001907_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G11810
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AT1G11620 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT1G27490 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT1G32140 No alias F-box family protein 0.06 OrthoFinder output from all 47 species
AT1G54550 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from all 47 species
AT1G59680 EDA1 F-box associated ubiquitination effector family protein 0.01 OrthoFinder output from all 47 species
AT1G62270 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT1G66490 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT1G67450 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from all 47 species
AT1G67455 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT2G24510 No alias F-box associated ubiquitination effector family protein 0.06 OrthoFinder output from all 47 species
AT2G33655 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from all 47 species
AT2G38590 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT2G39355 No alias No description available 0.01 OrthoFinder output from all 47 species
AT3G04250 No alias F-box associated ubiquitination effector family protein 0.03 OrthoFinder output from all 47 species
AT3G10430 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT3G13680 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT3G17265 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from all 47 species
AT3G17320 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT3G17480 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from all 47 species
AT3G17500 No alias F-box family protein 0.07 OrthoFinder output from all 47 species
AT3G17530 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT3G17540 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT3G17560 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT3G17570 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT3G17620 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT3G19470 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT3G19560 No alias F-box family protein 0.05 OrthoFinder output from all 47 species
AT3G19880 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT3G20690 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from all 47 species
AT3G20710 No alias F-box family protein 0.03 OrthoFinder output from all 47 species
AT3G21120 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT3G22350 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT3G22650 ATSFL61, SFL61, CEG F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT3G22700 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from all 47 species
AT3G22710 No alias F-box family protein 0.01 OrthoFinder output from all 47 species
AT3G22720 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from all 47 species
AT3G22730 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT3G22770 No alias F-box associated ubiquitination effector family protein 0.02 OrthoFinder output from all 47 species
AT3G22870 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT3G23680 No alias F-box associated ubiquitination effector family protein 0.05 OrthoFinder output from all 47 species
AT3G24580 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT3G24700 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT3G25090 No alias F-box associated ubiquitination effector family protein 0.07 OrthoFinder output from all 47 species
AT3G49520 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from all 47 species
AT4G04690 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from all 47 species
AT4G09870 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT4G10190 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT4G10740 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT4G17200 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT4G33290 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT5G25195 No alias No description available 0.02 OrthoFinder output from all 47 species
AT5G36200 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from all 47 species
AT5G36730 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT5G36820 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT5G41490 No alias F-box associated ubiquitination effector family protein 0.09 OrthoFinder output from all 47 species
AT5G41500 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT5G41510 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT5G47300 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT5G62830 No alias F-box associated ubiquitination effector family protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0004022 alcohol dehydrogenase (NAD+) activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0009808 lignin metabolic process IEP HCCA
BP GO:0009809 lignin biosynthetic process IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0018455 alcohol dehydrogenase [NAD(P)+] activity IEP HCCA
CC GO:0019005 SCF ubiquitin ligase complex IEP HCCA
MF GO:0045551 cinnamyl-alcohol dehydrogenase activity IEP HCCA
InterPro domains Description Start Stop
IPR006527 F-box-assoc_dom_typ1 197 360
IPR001810 F-box_dom 4 35
No external refs found!