AT1G11480


Description : eukaryotic translation initiation factor-related


Gene families : OG0003236 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003236_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G11480

Target Alias Description ECC score Gene Family Method Actions
Pir_g30833 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e010519_P006 Zm00001e010519 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle IEP HCCA
CC GO:0000322 storage vacuole IEP HCCA
CC GO:0000325 plant-type vacuole IEP HCCA
CC GO:0000326 protein storage vacuole IEP HCCA
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005654 nucleoplasm IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
CC GO:0005829 cytosol IEP HCCA
CC GO:0005956 protein kinase CK2 complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006498 N-terminal protein lipidation IEP HCCA
BP GO:0006499 N-terminal protein myristoylation IEP HCCA
BP GO:0006623 protein targeting to vacuole IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007033 vacuole organization IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0007267 cell-cell signaling IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0007623 circadian rhythm IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008284 positive regulation of cell population proliferation IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009616 RNAi-mediated antiviral immune response IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009630 gravitropism IEP HCCA
BP GO:0009756 carbohydrate mediated signaling IEP HCCA
BP GO:0009790 embryo development IEP HCCA
BP GO:0009793 embryo development ending in seed dormancy IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0009933 meristem structural organization IEP HCCA
BP GO:0010048 vernalization response IEP HCCA
BP GO:0010182 sugar mediated signaling pathway IEP HCCA
BP GO:0010212 response to ionizing radiation IEP HCCA
BP GO:0010225 response to UV-C IEP HCCA
BP GO:0010267 ta-siRNA processing IEP HCCA
BP GO:0010332 response to gamma radiation IEP HCCA
BP GO:0010359 regulation of anion channel activity IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0010628 positive regulation of gene expression IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016441 post-transcriptional gene silencing IEP HCCA
BP GO:0016569 obsolete covalent chromatin modification IEP HCCA
BP GO:0018377 protein myristoylation IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
BP GO:0019915 lipid storage IEP HCCA
BP GO:0022898 regulation of transmembrane transporter activity IEP HCCA
BP GO:0023052 signaling IEP HCCA
BP GO:0030422 siRNA processing IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
BP GO:0032409 regulation of transporter activity IEP HCCA
BP GO:0032412 regulation of monoatomic ion transmembrane transporter activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0034762 regulation of transmembrane transport IEP HCCA
BP GO:0034765 regulation of monoatomic ion transmembrane transport IEP HCCA
BP GO:0035194 RNA-mediated post-transcriptional gene silencing IEP HCCA
BP GO:0035196 miRNA processing IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042127 regulation of cell population proliferation IEP HCCA
BP GO:0042752 regulation of circadian rhythm IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043269 regulation of monoatomic ion transport IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043687 post-translational protein modification IEP HCCA
BP GO:0044070 regulation of monoatomic anion transport IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048511 rhythmic process IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048532 anatomical structure arrangement IEP HCCA
BP GO:0048573 photoperiodism, flowering IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050826 response to freezing IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051607 defense response to virus IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070918 regulatory ncRNA processing IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072665 protein localization to vacuole IEP HCCA
BP GO:0072666 establishment of protein localization to vacuole IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0140546 defense response to symbiont IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
BP GO:1903959 regulation of monoatomic anion transmembrane transport IEP HCCA
BP GO:2001020 regulation of response to DNA damage stimulus IEP HCCA

No InterPro domains available for this sequence

No external refs found!