AT1G11320


Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 46 Blast hits to 46 proteins in 14 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0004009 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004009_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G11320

Target Alias Description ECC score Gene Family Method Actions
Ala_g18436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05951 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.37G014000.1 Ceric.37G014000 not classified & original description: pacid=50616014... 0.05 OrthoFinder output from all 47 species
Len_g23133 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g02258 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo442643 No alias No description available 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion IDA Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009536 plastid IDA Interproscan
Type GO Term Name Evidence Source
BP GO:0000374 Group III intron splicing IEP HCCA
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
MF GO:0003964 RNA-directed DNA polymerase activity IEP HCCA
BP GO:0006278 RNA-templated DNA biosynthetic process IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0071897 DNA biosynthetic process IEP HCCA
BP GO:0090351 seedling development IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA

No InterPro domains available for this sequence

No external refs found!