AT1G10890


Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: petal, flower, leaf; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13340.1); Has 11769 Blast hits to 8435 proteins in 698 species: Archae - 22; Bacteria - 971; Metazoa - 5937; Fungi - 1065; Plants - 592; Viruses - 101; Other Eukaryotes - 3081 (source: NCBI BLink).


Gene families : OG0002396 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002396_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G10890
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
Als_g22454 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22347.t1 Aspi01Gene22347 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g35397 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g10607 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g04169 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15337 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e024181_P001 Zm00001e024181 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source
BP GO:0001708 cell fate specification IEP HCCA
MF GO:0003724 RNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006897 endocytosis IEP HCCA
MF GO:0008186 ATP-dependent activity, acting on RNA IEP HCCA
BP GO:0009880 embryonic pattern specification IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0032456 endocytic recycling IEP HCCA
CC GO:0034399 nuclear periphery IEP HCCA
BP GO:0090421 embryonic meristem initiation IEP HCCA
BP GO:0098876 vesicle-mediated transport to the plasma membrane IEP HCCA
InterPro domains Description Start Stop
IPR033371 ARGLU1 122 285
No external refs found!