Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: petal, flower, leaf; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13340.1); Has 11769 Blast hits to 8435 proteins in 698 species: Archae - 22; Bacteria - 971; Metazoa - 5937; Fungi - 1065; Plants - 592; Viruses - 101; Other Eukaryotes - 3081 (source: NCBI BLink).
Gene families : OG0002396 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002396_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT1G10890 | |
Cluster | HCCA: Cluster_94 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Als_g22454 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene22347.t1 | Aspi01Gene22347 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dac_g07501 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g35397 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g10607 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Pir_g04169 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g15337 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e024181_P001 | Zm00001e024181 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | ND | Interproscan |
BP | GO:0008150 | biological_process | ND | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001708 | cell fate specification | IEP | HCCA |
MF | GO:0003724 | RNA helicase activity | IEP | HCCA |
MF | GO:0004386 | helicase activity | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
BP | GO:0006897 | endocytosis | IEP | HCCA |
MF | GO:0008186 | ATP-dependent activity, acting on RNA | IEP | HCCA |
BP | GO:0009880 | embryonic pattern specification | IEP | HCCA |
BP | GO:0016197 | endosomal transport | IEP | HCCA |
BP | GO:0032456 | endocytic recycling | IEP | HCCA |
CC | GO:0034399 | nuclear periphery | IEP | HCCA |
BP | GO:0090421 | embryonic meristem initiation | IEP | HCCA |
BP | GO:0098876 | vesicle-mediated transport to the plasma membrane | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR033371 | ARGLU1 | 122 | 285 |
No external refs found! |