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  5. AT1G10220

AT1G10220


Description : BEST Arabidopsis thaliana protein match is: ZCF37 (TAIR:AT1G59590.1); Has 43 Blast hits to 43 proteins in 15 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).


Gene families : OG0001957 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001957_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G10220
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00170680 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT1G59590 ZCF37 ZCF37 0.04 OrthoFinder output from all 47 species
Aop_g01314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G036200.1 Ceric.14G036200 not classified & original description: pacid=50634867... 0.05 OrthoFinder output from all 47 species
Ceric.29G056800.1 Ceric.29G056800 not classified & original description: pacid=50625138... 0.04 OrthoFinder output from all 47 species
Ceric.29G057400.1 Ceric.29G057400 not classified & original description: pacid=50624954... 0.03 OrthoFinder output from all 47 species
Dde_g00500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g31740.1 ZCF37, LOC_Os03g31740 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g39720.1 LOC_Os07g39720 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g04167 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10427108g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10429506g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_10435417g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_160286g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_88586g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_955393g0010 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Msp_g18503 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g23874 ZCF37 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g13409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06099 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g58552 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g13039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g077810.1.1 ZCF37, Solyc04g077810 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g13818 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g55624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002093_P001 ZCF37, Zm00001e002093 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e035399_P001 Zm00001e035399 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0001666 response to hypoxia IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0008219 cell death IEP HCCA
BP GO:0009694 jasmonic acid metabolic process IEP HCCA
BP GO:0009695 jasmonic acid biosynthetic process IEP HCCA
BP GO:0010311 lateral root formation IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0030397 membrane disassembly IEP HCCA
BP GO:0033037 polysaccharide localization IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
BP GO:0036293 response to decreased oxygen levels IEP HCCA
BP GO:0036294 cellular response to decreased oxygen levels IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0052542 defense response by callose deposition IEP HCCA
BP GO:0052545 callose localization IEP HCCA
BP GO:0070482 response to oxygen levels IEP HCCA
BP GO:0071453 cellular response to oxygen levels IEP HCCA
BP GO:0071456 cellular response to hypoxia IEP HCCA
BP GO:1905393 plant organ formation IEP HCCA
MF GO:1990136 linoleate 9S-lipoxygenase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!