AT1G08990 (PGSIP5)

Aliases : PGSIP5

Description : plant glycogenin-like starch initiation protein 5

Gene families : OG0002672 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002672_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G08990

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00025p00245930	PGSIP3, GUX2,...	Cell...	0.07	OrthoFinder output from all 47 species
AMTR_s00025p00246110	PGSIP3, GUX2,...	Cell...	0.01	OrthoFinder output from all 47 species
AMTR_s00060p00013040	PGSIP3, GUX2,...	Cell...	0.07	OrthoFinder output from all 47 species
AT3G18660	PGSIP1, GUX1	plant glycogenin-like starch initiation protein 1	0.04	OrthoFinder output from all 47 species
AT4G33330	PGSIP3, GUX2	plant glycogenin-like starch initiation protein 3	0.06	OrthoFinder output from all 47 species
Aop_g10280	PGSIP2, GUX3	glucuronosyltransferase *(GUX) & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene67856.t1	PGSIP2, GUX3,...	glucuronosyltransferase *(GUX) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g62374	PGSIP2, GUX3	glucuronosyltransferase *(GUX) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g01641	PGSIP2, GUX3	glucuronosyltransferase *(GUX) & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g20937	PGSIP2, GUX3	glucuronosyltransferase *(GUX) & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g21504	PGSIP2, GUX3	glucuronosyltransferase *(GUX) & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g10467	PGSIP2, GUX3	glucuronosyltransferase *(GUX) & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01009501001	PGSIP3, GUX2	Cell...	0.04	OrthoFinder output from all 47 species
GSVIVT01026525001	PGSIP1, GUX1	Cell...	0.03	OrthoFinder output from all 47 species
Gb_06192	PGSIP1, GUX1	glucuronosyltransferase (GUX)	0.06	OrthoFinder output from all 47 species
Gb_33343	PGSIP1, GUX1	glucuronosyltransferase (GUX)	0.04	OrthoFinder output from all 47 species
LOC_Os01g65780.2	PGSIP1, GUX1,...	glucuronosyltransferase (GUX)	0.03	OrthoFinder output from all 47 species
LOC_Os03g08600.1	PGSIP3, GUX2,...	glucuronosyltransferase (GUX)	0.06	OrthoFinder output from all 47 species
Len_g19254	PGSIP2, GUX3	glucuronosyltransferase *(GUX) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g02012	PGSIP2, GUX3	glucuronosyltransferase *(GUX) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g13941	PGSIP2, GUX3	glucuronosyltransferase *(GUX) & original description: none	0.06	OrthoFinder output from all 47 species
MA_35705g0010	PGSIP1, GUX1	glucuronosyltransferase (GUX)	0.03	OrthoFinder output from all 47 species
MA_8597011g0010	PGSIP2, GUX3	glucuronosyltransferase (GUX)	0.03	OrthoFinder output from all 47 species
Mp4g08210.1	PGSIP1, GUX1	glucuronosyltransferase (GUX)	0.04	OrthoFinder output from all 47 species
Pir_g07503	PGSIP2, GUX3	glucuronosyltransferase *(GUX) & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g46456	PGSIP2, GUX3	glucuronosyltransferase *(GUX) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g16817	No alias	glucuronosyltransferase *(GUX) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc01g098970.3.1	PGSIP4, Solyc01g098970	glucuronosyltransferase (GUX)	0.01	OrthoFinder output from all 47 species
Solyc04g078980.4.1	PGSIP3, GUX2,...	glucuronosyltransferase (GUX)	0.02	OrthoFinder output from all 47 species
Solyc04g078990.4.1	PGSIP3, GUX2,...	glucuronosyltransferase (GUX)	0.07	OrthoFinder output from all 47 species
Solyc11g005760.3.1	PGSIP1, GUX1,...	glucuronosyltransferase (GUX)	0.03	OrthoFinder output from all 47 species
Zm00001e000623_P001	PGSIP3, GUX2,...	glucuronosyltransferase (GUX)	0.04	OrthoFinder output from all 47 species
Zm00001e014808_P002	PGSIP1, GUX1,...	glucuronosyltransferase (GUX)	0.04	OrthoFinder output from all 47 species
Zm00001e031711_P002	PGSIP1, GUX1,...	glucuronosyltransferase (GUX)	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005794	Golgi apparatus	IDA	Interproscan
CC	GO:0005794	Golgi apparatus	ISM	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0005982	starch metabolic process	RCA	Interproscan
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	None	Extended
BP	GO:0006826	iron ion transport	RCA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0007154	cell communication	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	ISS	Interproscan
BP	GO:0009267	cellular response to starvation	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0009991	response to extracellular stimulus	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010106	cellular response to iron ion starvation	RCA	Interproscan
BP	GO:0010167	response to nitrate	RCA	Interproscan
BP	GO:0015698	inorganic anion transport	None	Extended
BP	GO:0015706	nitrate transmembrane transport	RCA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	ISS	Interproscan
BP	GO:0030001	metal ion transport	None	Extended
BP	GO:0031667	response to nutrient levels	None	Extended
BP	GO:0031668	cellular response to extracellular stimulus	None	Extended
BP	GO:0031669	cellular response to nutrient levels	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042594	response to starvation	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0071496	cellular response to external stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098661	inorganic anion transmembrane transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1902025	nitrate import	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0002238	response to molecule of fungal origin	IEP	HCCA
MF	GO:0004620	phospholipase activity	IEP	HCCA
BP	GO:0006694	steroid biosynthetic process	IEP	HCCA
BP	GO:0008202	steroid metabolic process	IEP	HCCA
MF	GO:0008417	fucosyltransferase activity	IEP	HCCA
BP	GO:0009791	post-embryonic development	IEP	HCCA
BP	GO:0009806	lignan metabolic process	IEP	HCCA
BP	GO:0009807	lignan biosynthetic process	IEP	HCCA
BP	GO:0010053	root epidermal cell differentiation	IEP	HCCA
BP	GO:0010054	trichoblast differentiation	IEP	HCCA
BP	GO:0010311	lateral root formation	IEP	HCCA
BP	GO:0010359	regulation of anion channel activity	IEP	HCCA
BP	GO:0016128	phytosteroid metabolic process	IEP	HCCA
BP	GO:0016129	phytosteroid biosynthetic process	IEP	HCCA
BP	GO:0016131	brassinosteroid metabolic process	IEP	HCCA
BP	GO:0016132	brassinosteroid biosynthetic process	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA
MF	GO:0019825	oxygen binding	IEP	HCCA
BP	GO:0021700	developmental maturation	IEP	HCCA
BP	GO:0022898	regulation of transmembrane transporter activity	IEP	HCCA
BP	GO:0030154	cell differentiation	IEP	HCCA
BP	GO:0032409	regulation of transporter activity	IEP	HCCA
BP	GO:0032412	regulation of monoatomic ion transmembrane transporter activity	IEP	HCCA
BP	GO:0032502	developmental process	IEP	HCCA
BP	GO:0042445	hormone metabolic process	IEP	HCCA
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	HCCA
BP	GO:0044070	regulation of monoatomic anion transport	IEP	HCCA
MF	GO:0045735	nutrient reservoir activity	IEP	HCCA
BP	GO:0048364	root development	IEP	HCCA
BP	GO:0048469	cell maturation	IEP	HCCA
BP	GO:0048527	lateral root development	IEP	HCCA
BP	GO:0048528	post-embryonic root development	IEP	HCCA
BP	GO:0048764	trichoblast maturation	IEP	HCCA
BP	GO:0048765	root hair cell differentiation	IEP	HCCA
BP	GO:0048767	root hair elongation	IEP	HCCA
BP	GO:0048869	cellular developmental process	IEP	HCCA
BP	GO:0071695	anatomical structure maturation	IEP	HCCA
BP	GO:0080022	primary root development	IEP	HCCA
MF	GO:0080044	quercetin 7-O-glucosyltransferase activity	IEP	HCCA
MF	GO:0080045	quercetin 3'-O-glucosyltransferase activity	IEP	HCCA
BP	GO:0090627	plant epidermal cell differentiation	IEP	HCCA
BP	GO:0090696	post-embryonic plant organ development	IEP	HCCA
BP	GO:0099402	plant organ development	IEP	HCCA
BP	GO:1903959	regulation of monoatomic anion transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002495	Glyco_trans_8	285	483

External Links

No external refs found!

AT1G08990 (PGSIP5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation