AT1G07410 (RABA2b, ATRAB-A2B,...)


Aliases : RABA2b, ATRAB-A2B, ATRABA2B, RAB-A2B

Description : RAB GTPase homolog A2B


Gene families : OG0000247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000247_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G07410
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AT2G33870 ArRABA1h RAB GTPase homolog A1H 0.04 OrthoFinder output from all 47 species
Adi_g015797 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g078039 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g09261 AtRABA5a, RABA5a A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g30591 RABA2b,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03446 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17341 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0013.g013094 AtRABA1f, RABA1f A-class RAB GTPase & original description: CDS=414-1064 0.03 OrthoFinder output from all 47 species
Azfi_s0158.g053866 ATRABA2A,... A-class RAB GTPase & original description: CDS=282-950 0.03 OrthoFinder output from all 47 species
Ceric.34G030300.1 AtRABA1f,... A-class RAB GTPase & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020961.97 AtRABA1e, RABA1e Vesicle trafficking.regulation of membrane tethering and... 0.02 OrthoFinder output from all 47 species
Cre03.g189250 ATRABA2A,... Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder output from all 47 species
Dac_g05558 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os07g44040.1 AtRABA5a,... A-class RAB GTPase 0.04 OrthoFinder output from all 47 species
LOC_Os08g41340.1 AtRABA5d,... A-class RAB GTPase 0.07 OrthoFinder output from all 47 species
LOC_Os09g15790.1 AtRABA1f,... A-class RAB GTPase 0.04 OrthoFinder output from all 47 species
Pnu_g10152 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08711 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27739 No alias A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g006270.3.1 AtRABA1f,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Zm00001e033825_P001 AtRABA1f,... A-class RAB GTPase 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding ISS Interproscan
CC GO:0005768 endosome IDA Interproscan
CC GO:0005794 Golgi apparatus ISM Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0006457 protein folding RCA Interproscan
BP GO:0009408 response to heat RCA Interproscan
CC GO:0009504 cell plate IDA Interproscan
BP GO:0009644 response to high light intensity RCA Interproscan
BP GO:0016192 vesicle-mediated transport RCA Interproscan
BP GO:0042542 response to hydrogen peroxide RCA Interproscan
Type GO Term Name Evidence Source
MF GO:0004439 phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity IEP HCCA
MF GO:0005200 structural constituent of cytoskeleton IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
MF GO:0009672 auxin:proton symporter activity IEP HCCA
BP GO:0009827 plant-type cell wall modification IEP HCCA
BP GO:0009914 hormone transport IEP HCCA
BP GO:0009926 auxin polar transport IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010252 auxin homeostasis IEP HCCA
BP GO:0010315 auxin export across the plasma membrane IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0010928 regulation of auxin mediated signaling pathway IEP HCCA
MF GO:0015293 symporter activity IEP HCCA
MF GO:0015294 solute:monoatomic cation symporter activity IEP HCCA
MF GO:0015295 solute:proton symporter activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0032957 inositol trisphosphate metabolic process IEP HCCA
MF GO:0034593 phosphatidylinositol bisphosphate phosphatase activity IEP HCCA
MF GO:0034595 phosphatidylinositol phosphate 5-phosphatase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043647 inositol phosphate metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046164 alcohol catabolic process IEP HCCA
BP GO:0046174 polyol catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP HCCA
BP GO:0046855 inositol phosphate dephosphorylation IEP HCCA
BP GO:0048868 pollen tube development IEP HCCA
MF GO:0052866 phosphatidylinositol phosphate phosphatase activity IEP HCCA
BP GO:0060918 auxin transport IEP HCCA
BP GO:0071545 inositol phosphate catabolic process IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0080161 auxin transmembrane transporter activity IEP HCCA
MF GO:0106019 phosphatidylinositol-4,5-bisphosphate phosphatase activity IEP HCCA
BP GO:0140115 export across plasma membrane IEP HCCA
BP GO:0140352 export from cell IEP HCCA
BP GO:1901616 organic hydroxy compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 14 174
No external refs found!