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  5. AT1G05990

AT1G05990 (RHS1)


Aliases : RHS1

Description : EF hand calcium-binding protein family


Gene families : OG0000205 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000205_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G05990

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00186360 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT5G44460 CML43 calmodulin like 43 0.05 OrthoFinder output from all 47 species
Aev_g05135 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g20328 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene11697.t1 CML42, Aspi01Gene11697 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34654.t1 CML42, Aspi01Gene34654 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0143.g051442 RHS1 not classified & original description: CDS=1-564 0.09 OrthoFinder output from all 47 species
Ceric.06G016200.1 CPK17, Ceric.06G016200 calcium sensor *(CML) & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g29729 CML42 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06167 CML42 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g11295 CML39, CML37 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g25457 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
MA_13199g0010 CML42 Probable calcium-binding protein CML27 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
MA_27386g0010 UNE14 Probable calcium-binding protein CML27 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
MA_822732g0010 CML39, CML37 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e038252_P001 CML43, Zm00001e038252 Probable calcium-binding protein CML27 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISS Interproscan
CC GO:0005575 cellular_component ND Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 77 143
IPR002048 EF_hand_dom 5 67
No external refs found!