AT1G05880 (ARI12, ATARI12)

Aliases : ARI12, ATARI12

Description : RING/U-box superfamily protein

Gene families : OG0001677 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001677_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G05880

Target	Alias	Description	ECC score	Gene Family Method
Aspi01Gene22392.t1	ARI7, ATARI7,...	RBR-Ariadne-class E3 ubiquitin ligase & original...	0.03	OrthoFinder output from all 47 species
MA_170316g0010	ARI7, ATARI7	RBR-Ariadne-class E3 ubiquitin ligase	0.03	OrthoFinder output from all 47 species
Mp2g00840.1	ARI8, ATARI8	RBR-Ariadne-class E3 ubiquitin ligase	0.03	OrthoFinder output from all 47 species
Pnu_g06686	ARI8, ATARI8	RBR-Ariadne-class E3 ubiquitin ligase & original...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0001666	response to hypoxia	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009411	response to UV	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010224	response to UV-B	IEP	Interproscan
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0036293	response to decreased oxygen levels	None	Extended
BP	GO:0036294	cellular response to decreased oxygen levels	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042991	obsolete transcription factor import into nucleus	RCA	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0070482	response to oxygen levels	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071453	cellular response to oxygen levels	None	Extended
BP	GO:0071456	cellular response to hypoxia	IEP	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005215	transporter activity	IEP	HCCA
BP	GO:0006952	defense response	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
BP	GO:0010193	response to ozone	IEP	HCCA
BP	GO:0010583	response to cyclopentenone	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002867	IBR_dom	255	297

External Links

No external refs found!