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AT1G04770


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG0001526 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001526_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G04770

Target Alias Description ECC score Gene Family Method Actions
Dcu_g02731 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01011343001 No alias Cell cycle.mitosis and meiosis.meiotic... 0.04 OrthoFinder output from all 47 species
GSVIVT01028569001 ATSDI1 Cell cycle.mitosis and meiosis.meiotic... 0.1 OrthoFinder output from all 47 species
Gb_38948 ATSDI1 Protein SULFUR DEFICIENCY-INDUCED 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os05g43040.1 LOC_Os05g43040 Protein SULFUR DEFICIENCY-INDUCED 2 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
MA_10425911g0010 No alias Protein POLLENLESS 3-LIKE 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10429050g0010 No alias Protein POLLENLESS 3-LIKE 2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_3682g0010 No alias Protein POLLENLESS 3-LIKE 2 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
MA_8881560g0010 No alias Protein POLLENLESS 3-LIKE 2 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Nbi_g05233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18458 No alias regulatory protein *(SDI) of sulfate homeostasis &... 0.02 OrthoFinder output from all 47 species
Sam_g03374 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g007970.3.1 ATSDI1, Solyc06g007970 Protein SULFUR DEFICIENCY-INDUCED 1 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Solyc09g061700.3.1 ATSDI1, Solyc09g061700 Protein SULFUR DEFICIENCY-INDUCED 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc09g091600.4.1 Solyc09g091600 Protein SULFUR DEFICIENCY-INDUCED 2 OS=Arabidopsis... 0.1 OrthoFinder output from all 47 species
Zm00001e039019_P001 ATSDI1, Zm00001e039019 Protein SULFUR DEFICIENCY-INDUCED 1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009658 chloroplast organization IMP Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
BP GO:0000103 sulfate assimilation IEP HCCA
MF GO:0003933 GTP cyclohydrolase activity IEP HCCA
MF GO:0003934 GTP cyclohydrolase I activity IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
BP GO:0009683 indoleacetic acid metabolic process IEP HCCA
BP GO:0009684 indoleacetic acid biosynthetic process IEP HCCA
BP GO:0009850 auxin metabolic process IEP HCCA
BP GO:0009851 auxin biosynthetic process IEP HCCA
MF GO:0009973 adenylyl-sulfate reductase activity IEP HCCA
BP GO:0010288 response to lead ion IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
MF GO:0019238 cyclohydrolase activity IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
BP GO:0019419 sulfate reduction IEP HCCA
BP GO:0019757 glycosinolate metabolic process IEP HCCA
BP GO:0019758 glycosinolate biosynthetic process IEP HCCA
BP GO:0019760 glucosinolate metabolic process IEP HCCA
BP GO:0019761 glucosinolate biosynthetic process IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
BP GO:0042435 indole-containing compound biosynthetic process IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
BP GO:0042446 hormone biosynthetic process IEP HCCA
BP GO:0044550 secondary metabolite biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR019734 TPR_repeat 161 192
No external refs found!