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  5. AT1G04560

AT1G04560


Description : AWPM-19-like family protein


Gene families : OG0000473 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000473_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G04560
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Adi_g011454 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g39496 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34671.t1 Aspi01Gene34671 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34673.t1 Aspi01Gene34673 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007412 No alias not classified & original description: CDS=218-754 0.06 OrthoFinder output from all 47 species
Azfi_s0050.g031077 No alias not classified & original description: CDS=1-387 0.08 OrthoFinder output from all 47 species
Azfi_s0185.g056678 No alias not classified & original description: CDS=1-579 0.03 OrthoFinder output from all 47 species
Ceric.30G074200.1 Ceric.30G074200 not classified & original description: pacid=50608798... 0.03 OrthoFinder output from all 47 species
Ceric.37G005000.1 Ceric.37G005000 not classified & original description: pacid=50616787... 0.03 OrthoFinder output from all 47 species
Ceric.37G005200.1 Ceric.37G005200 not classified & original description: pacid=50615572... 0.03 OrthoFinder output from all 47 species
Dde_g01167 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11075 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01027944001 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica 0.09 OrthoFinder output from all 47 species
GSVIVT01031072001 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica 0.08 OrthoFinder output from all 47 species
Gb_30286 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
LOC_Os05g31670.1 LOC_Os05g31670 Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.18 OrthoFinder output from all 47 species
LOC_Os07g24000.1 LOC_Os07g24000 Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.2 OrthoFinder output from all 47 species
Len_g37428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g53674 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g32766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_101266g0010 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
MA_16601g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_199g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_812511g0010 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_8902028g0010 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Mp3g04480.1 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Mp3g04490.1 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Mp3g04500.1 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Msp_g11224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26052 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g46886 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g04580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06045 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40617 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06734 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13698 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29334 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g40749 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo37585 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
Solyc01g080290.3.1 Solyc01g080290 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc02g071310.3.1 Solyc02g071310 Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Solyc05g053160.3.1 Solyc05g053160 Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.21 OrthoFinder output from all 47 species
Solyc09g090800.2.1 Solyc09g090800 Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.22 OrthoFinder output from all 47 species
Spa_g02439 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g04019 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g16199 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g29733 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39083 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e026824_P001 Zm00001e026824 Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e033373_P001 Zm00001e033373 Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.16 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0000322 storage vacuole IEP HCCA
CC GO:0000325 plant-type vacuole IEP HCCA
CC GO:0000326 protein storage vacuole IEP HCCA
BP GO:0001101 response to acid chemical IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0004033 aldo-keto reductase (NADP) activity IEP HCCA
MF GO:0004392 heme oxygenase (decyclizing) activity IEP HCCA
MF GO:0005372 water transmembrane transporter activity IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
MF GO:0008106 alcohol dehydrogenase (NADP+) activity IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008379 thioredoxin peroxidase activity IEP HCCA
MF GO:0008429 phosphatidylethanolamine binding IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009269 response to desiccation IEP HCCA
BP GO:0009414 response to water deprivation IEP HCCA
BP GO:0009415 response to water IEP HCCA
BP GO:0009790 embryo development IEP HCCA
BP GO:0009793 embryo development ending in seed dormancy IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010162 seed dormancy process IEP HCCA
BP GO:0010231 maintenance of seed dormancy IEP HCCA
BP GO:0010264 myo-inositol hexakisphosphate biosynthetic process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015250 water channel activity IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen IEP HCCA
BP GO:0019759 glycosinolate catabolic process IEP HCCA
BP GO:0019762 glucosinolate catabolic process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0022611 dormancy process IEP HCCA
BP GO:0031407 oxylipin metabolic process IEP HCCA
BP GO:0031408 oxylipin biosynthetic process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0032958 inositol phosphate biosynthetic process IEP HCCA
BP GO:0033517 myo-inositol hexakisphosphate metabolic process IEP HCCA
CC GO:0042807 central vacuole IEP HCCA
BP GO:0044273 sulfur compound catabolic process IEP HCCA
BP GO:0045893 positive regulation of DNA-templated transcription IEP HCCA
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0048316 seed development IEP HCCA
BP GO:0048609 multicellular organismal reproductive process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0050898 nitrile metabolic process IEP HCCA
BP GO:0051254 positive regulation of RNA metabolic process IEP HCCA
MF GO:0051920 peroxiredoxin activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
MF GO:0071614 linoleic acid epoxygenase activity IEP HCCA
BP GO:0080028 nitrile biosynthetic process IEP HCCA
BP GO:0097437 maintenance of dormancy IEP HCCA
MF GO:0140824 thioredoxin-dependent peroxiredoxin activity IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1902680 positive regulation of RNA biosynthetic process IEP HCCA
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR008390 AWPM-19 15 143
No external refs found!