AT1G04130 (AtTPR2, TPR2)


Aliases : AtTPR2, TPR2

Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG0006349 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006349_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G04130

Target Alias Description ECC score Gene Family Method Actions
Cba_g78009 AtTPR2, TPR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04629 AtTPR2, TPR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19145 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
MF GO:0051879 Hsp90 protein binding IPI Interproscan
Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle IEP HCCA
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009827 plant-type cell wall modification IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0019722 calcium-mediated signaling IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0019932 second-messenger-mediated signaling IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR019734 TPR_repeat 106 138
No external refs found!