AT1G03880 (CRU2, CRB)

Aliases : CRU2, CRB

Description : cruciferin 2

Gene families : OG0000481 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000481_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G03880
Cluster	HCCA: Cluster_102

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00067p00027690	evm_27.TU.AmTr_v1...	11S globulin seed storage protein 2 OS=Sesamum indicum	0.04	OrthoFinder output from all 47 species
Aop_g17109	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g29046	CRU3, CRC	Globulin-type seed storage protein *(CR) & original...	0.05	OrthoFinder output from all 47 species
Aop_g67915	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aop_g69361	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Azfi_s0007.g011190	No alias	Globulin-type seed storage protein *(CR) & original...	0.03	OrthoFinder output from all 47 species
Azfi_s0007.g011215	No alias	Globulin-type seed storage protein *(CR) & original...	0.04	OrthoFinder output from all 47 species
Azfi_s0010.g012318	No alias	Globulin-type seed storage protein & original...	0.03	OrthoFinder output from all 47 species
Azfi_s0045.g029739	CRU3, CRC	Globulin-type seed storage protein *(CR) & original...	0.05	OrthoFinder output from all 47 species
Azfi_s0078.g038308	No alias	Globulin-type seed storage protein *(CR) & original...	0.03	OrthoFinder output from all 47 species
Azfi_s0104.g044758	No alias	Globulin-type seed storage protein *(CR) & original...	0.04	OrthoFinder output from all 47 species
Azfi_s0152.g053400	No alias	Globulin-type seed storage protein *(CR) & original...	0.03	OrthoFinder output from all 47 species
Azfi_s0152.g053408	No alias	Globulin-type seed storage protein *(CR) & original...	0.03	OrthoFinder output from all 47 species
Ceric.15G030600.1	CRU2, CRB,...	Globulin-type seed storage protein *(CR) & original...	0.04	OrthoFinder output from all 47 species
Ceric.15G030700.1	CRU2, CRB,...	Globulin-type seed storage protein *(CR) & original...	0.04	OrthoFinder output from all 47 species
GSVIVT01028337001	CRU1, CRA1, ATCRA1	11S globulin subunit beta OS=Cucurbita maxima	0.05	OrthoFinder output from all 47 species
GSVIVT01028338001	CRU3, CRC	11S globulin subunit beta OS=Cucurbita maxima	0.05	OrthoFinder output from all 47 species
GSVIVT01028341001	CRU3, CRC	11S globulin subunit beta OS=Cucurbita maxima	0.05	OrthoFinder output from all 47 species
Gb_01530	CRU2, CRB	no description available(sp\|a0a222nnm9\|cos1_cocnu : 359.0)	0.04	OrthoFinder output from all 47 species
Gb_12801	No alias	no description available(sp\|a0a222nnm9\|cos1_cocnu : 216.0)	0.04	OrthoFinder output from all 47 species
Gb_14134	No alias	no description available(sp\|a0a222nnm9\|cos1_cocnu : 216.0)	0.03	OrthoFinder output from all 47 species
Gb_18954	No alias	no description available(sp\|a0a222nnm9\|cos1_cocnu : 172.0)	0.04	OrthoFinder output from all 47 species
Gb_26731	No alias	no description available(sp\|a0a222nnm9\|cos1_cocnu : 216.0)	0.03	OrthoFinder output from all 47 species
Gb_26733	No alias	no description available(sp\|a0a222nnm9\|cos1_cocnu : 139.0)	0.06	OrthoFinder output from all 47 species
Gb_30214	CRU1, CRA1, ATCRA1	no description available(sp\|a0a1l6k371\|jugn4_jugni : 301.0)	0.05	OrthoFinder output from all 47 species
Gb_41467	No alias	no description available(sp\|a0a222nnm9\|cos1_cocnu : 82.0)	0.02	OrthoFinder output from all 47 species
LOC_Os01g55690.1	CRU1, CRA1,...	Glutelin type-A 1 OS=Oryza sativa subsp. japonica...	0.04	OrthoFinder output from all 47 species
LOC_Os02g14600.1	CRU1, CRA1,...	Glutelin type-B 5 OS=Oryza sativa subsp. japonica...	0.02	OrthoFinder output from all 47 species
LOC_Os02g15070.1	CRU1, CRA1,...	Glutelin type-B 2 OS=Oryza sativa subsp. japonica...	0.02	OrthoFinder output from all 47 species
LOC_Os02g15090.1	CRU1, CRA1,...	Glutelin type-D 1 OS=Oryza sativa subsp. japonica...	0.02	OrthoFinder output from all 47 species
LOC_Os02g15150.1	CRU1, CRA1,...	Glutelin type-B 2 OS=Oryza sativa subsp. japonica...	0.02	OrthoFinder output from all 47 species
LOC_Os02g15169.1	CRU1, CRA1,...	Glutelin type-B 1 OS=Oryza sativa subsp. japonica...	0.02	OrthoFinder output from all 47 species
LOC_Os02g15178.1	CRU1, CRA1,...	Glutelin type-B 1 OS=Oryza sativa subsp. japonica...	0.02	OrthoFinder output from all 47 species
LOC_Os02g16820.1	CRU1, CRA1,...	Glutelin type-B 5 OS=Oryza sativa subsp. japonica...	0.02	OrthoFinder output from all 47 species
LOC_Os02g16830.1	CRU1, CRA1,...	Glutelin type-B 4 OS=Oryza sativa subsp. japonica...	0.02	OrthoFinder output from all 47 species
LOC_Os02g25640.1	CRU1, CRA1,...	Glutelin type-A 1 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
LOC_Os03g31360.1	CRU1, CRA1,...	Glutelin type-A 3 OS=Oryza sativa subsp. japonica...	0.02	OrthoFinder output from all 47 species
LOC_Os09g37976.1	LOC_Os09g37976	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
LOC_Os10g26060.1	CRU1, CRA1,...	Glutelin type-A 2 OS=Oryza sativa subsp. japonica...	0.04	OrthoFinder output from all 47 species
Len_g07654	No alias	Globulin-type seed storage protein *(CR) & original...	0.04	OrthoFinder output from all 47 species
Len_g37579	No alias	Globulin-type seed storage protein *(CR) & original...	0.04	OrthoFinder output from all 47 species
Lfl_g32032	No alias	Globulin-type seed storage protein *(CR) & original...	0.04	OrthoFinder output from all 47 species
MA_28880g0020	CRU3, CRC	12S seed storage protein CRD OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
MA_467g0010	No alias	no description available(sp\|q2tpw5\|jugr4_jugre : 99.8)	0.03	OrthoFinder output from all 47 species
MA_67677g0010	No alias	no description available(sp\|q2tpw5\|jugr4_jugre : 254.0)	0.03	OrthoFinder output from all 47 species
MA_7329469g0010	No alias	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
MA_7937116g0010	No alias	no description available(sp\|q2tpw5\|jugr4_jugre : 116.0)	0.04	OrthoFinder output from all 47 species
MA_9853020g0010	No alias	12S seed storage protein CRD OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Msp_g16700	CRU2, CRB	Globulin-type seed storage protein *(CR) & original...	0.03	OrthoFinder output from all 47 species
Msp_g20774	No alias	Globulin-type seed storage protein *(CR) & original...	0.03	OrthoFinder output from all 47 species
Msp_g44561	No alias	Globulin-type seed storage protein *(CR) & original...	0.03	OrthoFinder output from all 47 species
Ore_g04135	CRU3, CRC	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g15802	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g21695	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g21867	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g39838	CRU3, CRC	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g40299	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g43215	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g43216	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g43224	No alias	Globulin-type seed storage protein *(CR) & original...	0.04	OrthoFinder output from all 47 species
Ore_g43844	No alias	Globulin-type seed storage protein *(CR) & original...	0.03	OrthoFinder output from all 47 species
Pir_g15974	No alias	Globulin-type seed storage protein *(CR) & original...	0.02	OrthoFinder output from all 47 species
Pnu_g25952	No alias	Globulin-type seed storage protein *(CR) & original...	0.06	OrthoFinder output from all 47 species
Solyc03g005580.2.1	CRU1, CRA1,...	no description available(sp\|a0a1l6k371\|jugn4_jugni : 439.0)	0.05	OrthoFinder output from all 47 species
Solyc09g025210.3.1	CRU1, CRA1,...	no description available(sp\|q2tpw5\|jugr4_jugre : 424.0)	0.05	OrthoFinder output from all 47 species
Solyc09g072560.4.1	CRU1, CRA1,...	11S globulin seed storage protein 2 OS=Sesamum indicum...	0.05	OrthoFinder output from all 47 species
Solyc09g090150.4.1	CRU2, CRB, Solyc09g090150	no description available(sp\|a0a1l6k371\|jugn4_jugni : 418.0)	0.05	OrthoFinder output from all 47 species
Spa_g49550	No alias	Globulin-type seed storage protein *(CR) & original...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009409	response to cold	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009639	response to red or far red light	None	Extended
BP	GO:0009640	photomorphogenesis	RCA	Interproscan
BP	GO:0009685	gibberellin metabolic process	None	Extended
BP	GO:0009686	gibberellin biosynthetic process	RCA	Interproscan
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009737	response to abscisic acid	IEP	Interproscan
BP	GO:0009756	carbohydrate mediated signaling	None	Extended
BP	GO:0009790	embryo development	None	Extended
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009793	embryo development ending in seed dormancy	RCA	Interproscan
BP	GO:0009845	seed germination	RCA	Interproscan
BP	GO:0009845	seed germination	TAS	Interproscan
BP	GO:0009909	regulation of flower development	RCA	Interproscan
BP	GO:0009933	meristem structural organization	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010162	seed dormancy process	RCA	Interproscan
BP	GO:0010182	sugar mediated signaling pathway	RCA	Interproscan
BP	GO:0010228	vegetative to reproductive phase transition of meristem	RCA	Interproscan
BP	GO:0010431	seed maturation	IDA	Interproscan
BP	GO:0016053	organic acid biosynthetic process	None	Extended
BP	GO:0016101	diterpenoid metabolic process	None	Extended
BP	GO:0016102	diterpenoid biosynthetic process	None	Extended
BP	GO:0016114	terpenoid biosynthetic process	None	Extended
BP	GO:0016567	protein ubiquitination	RCA	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019915	lipid storage	RCA	Interproscan
BP	GO:0021700	developmental maturation	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022611	dormancy process	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032870	cellular response to hormone stimulus	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
MF	GO:0045735	nutrient reservoir activity	IDA	Interproscan
MF	GO:0045735	nutrient reservoir activity	ISS	Interproscan
BP	GO:0048532	anatomical structure arrangement	None	Extended
BP	GO:0048580	regulation of post-embryonic development	None	Extended
BP	GO:0048609	multicellular organismal reproductive process	None	Extended
BP	GO:0048831	regulation of shoot system development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050826	response to freezing	RCA	Interproscan
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051235	maintenance of location	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071215	cellular response to abscisic acid stimulus	IDA	Interproscan
BP	GO:0071310	cellular response to organic substance	None	Extended
BP	GO:0071396	cellular response to lipid	None	Extended
BP	GO:0071495	cellular response to endogenous stimulus	None	Extended
BP	GO:0071695	anatomical structure maturation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
BP	GO:0097306	cellular response to alcohol	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1901701	cellular response to oxygen-containing compound	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended
BP	GO:2000241	regulation of reproductive process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000578	embryonic axis specification	IEP	HCCA
MF	GO:0004392	heme oxygenase (decyclizing) activity	IEP	HCCA
MF	GO:0004497	monooxygenase activity	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
BP	GO:0006869	lipid transport	IEP	HCCA
BP	GO:0008284	positive regulation of cell population proliferation	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
BP	GO:0009798	axis specification	IEP	HCCA
BP	GO:0009880	embryonic pattern specification	IEP	HCCA
BP	GO:0009942	longitudinal axis specification	IEP	HCCA
BP	GO:0010654	apical cell fate commitment	IEP	HCCA
MF	GO:0016712	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
MF	GO:0019900	kinase binding	IEP	HCCA
MF	GO:0019901	protein kinase binding	IEP	HCCA
BP	GO:0031407	oxylipin metabolic process	IEP	HCCA
BP	GO:0031408	oxylipin biosynthetic process	IEP	HCCA
BP	GO:0034389	lipid droplet organization	IEP	HCCA
BP	GO:0042127	regulation of cell population proliferation	IEP	HCCA
CC	GO:0042735	protein body	IEP	HCCA
MF	GO:0043424	protein histidine kinase binding	IEP	HCCA
BP	GO:0045165	cell fate commitment	IEP	HCCA
BP	GO:0048366	leaf development	IEP	HCCA
BP	GO:0048825	cotyledon development	IEP	HCCA
BP	GO:0048827	phyllome development	IEP	HCCA
BP	GO:0048859	formation of anatomical boundary	IEP	HCCA
BP	GO:0051301	cell division	IEP	HCCA
MF	GO:0071614	linoleic acid epoxygenase activity	IEP	HCCA
BP	GO:0080167	response to karrikin	IEP	HCCA
BP	GO:0090451	cotyledon boundary formation	IEP	HCCA
BP	GO:0090691	formation of plant organ boundary	IEP	HCCA
BP	GO:0099402	plant organ development	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006045	Cupin_1	283	430
IPR006045	Cupin_1	35	191

External Links

No external refs found!

AT1G03880 (CRU2, CRB)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation