AT1G03120 (RAB28, ATRAB28)

Aliases : RAB28, ATRAB28

Description : responsive to abscisic acid 28

Gene families : OG0003000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003000_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G03120
Cluster	HCCA: Cluster_14

Target	Alias	Description	ECC score	Gene Family Method
AT3G22490	No alias	Seed maturation protein	0.03	OrthoFinder output from all 47 species
AT3G22500	ATECP31	Seed maturation protein	0.02	OrthoFinder output from all 47 species
LOC_Os03g06360.1	LOC_Os03g06360	Late embryogenesis abundant protein D-34 OS=Gossypium...	0.02	OrthoFinder output from all 47 species
LOC_Os03g53620.1	ATECP31, LOC_Os03g53620	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
LOC_Os06g23350.1	LOC_Os06g23350	Late embryogenesis abundant protein D-34 OS=Gossypium...	0.02	OrthoFinder output from all 47 species
MA_216273g0010	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Solyc09g065360.4.1	Solyc09g065360	Late embryogenesis abundant protein 31 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc09g082110.4.1	Solyc09g082110	Late embryogenesis abundant protein D-34 OS=Gossypium...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISS	Interproscan
CC	GO:0005730	nucleolus	IDA	Interproscan
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0006873	cellular monoatomic ion homeostasis	IMP	Interproscan
BP	GO:0007275	multicellular organism development	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009845	seed germination	IMP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0010226	response to lithium ion	IMP	Interproscan
BP	GO:0019725	cellular homeostasis	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042592	homeostatic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050801	monoatomic ion homeostasis	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0055082	cellular chemical homeostasis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008808	cardiolipin synthase activity	IEP	HCCA
BP	GO:0010162	seed dormancy process	IEP	HCCA
MF	GO:0016780	phosphotransferase activity, for other substituted phosphate groups	IEP	HCCA
BP	GO:0019722	calcium-mediated signaling	IEP	HCCA
BP	GO:0019915	lipid storage	IEP	HCCA
BP	GO:0019932	second-messenger-mediated signaling	IEP	HCCA
BP	GO:0022611	dormancy process	IEP	HCCA
MF	GO:0030572	phosphatidyltransferase activity	IEP	HCCA
BP	GO:0048609	multicellular organismal reproductive process	IEP	HCCA
BP	GO:0051235	maintenance of location	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007011	LEA_SMP_dom	123	181
IPR007011	LEA_SMP_dom	58	115

External Links

No external refs found!