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Gb_37740


Description : RING-v-class E3 ligase


Gene families : OG_01_0000436 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000436_tree ,
OG_02_0000506 (LandPlants) Phylogenetic Tree(s): OG_02_0000506_tree ,
OG_03_0001067 (SeedPlants) Phylogenetic Tree(s): OG_03_0001067_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_37740
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00203490 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AT4G02075 PIT1 RING/FYVE/PHD zinc finger superfamily protein 0.03 Archaeplastida
AT5G62460 No alias RING/FYVE/PHD zinc finger superfamily protein 0.02 Archaeplastida
GSVIVT01011789001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01028110001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.06 Archaeplastida
LOC_Os01g49280.1 No alias RING-v-class E3 ligase 0.05 Archaeplastida
LOC_Os11g38800.1 No alias RING-v-class E3 ligase 0.04 Archaeplastida
Mp8g15410.1 No alias RING-v-class E3 ligase 0.02 Archaeplastida
Solyc01g010880.3.1 No alias RING-v-class E3 ligase 0.04 Archaeplastida
Solyc01g020190.2.1 No alias Probable E3 ubiquitin ligase SUD1 OS=Arabidopsis... 0.02 Archaeplastida
Solyc01g079530.4.1 No alias RING-v-class E3 ligase 0.04 Archaeplastida
Solyc02g091230.4.1 No alias RING-v-class E3 ligase 0.02 Archaeplastida
Solyc03g116030.4.1 No alias RING-v-class E3 ligase 0.03 Archaeplastida
Solyc04g007600.4.1 No alias RING-v-class E3 ligase 0.02 Archaeplastida
Solyc05g008390.3.1 No alias RING-v-class E3 ligase 0.02 Archaeplastida
Solyc06g069780.4.1 No alias RING-v-class E3 ligase 0.04 Archaeplastida
Zm00001e021220_P001 No alias RING-v-class E3 ligase 0.04 Archaeplastida
Zm00001e026209_P003 No alias RING-v-class E3 ligase 0.02 Archaeplastida
Zm00001e031477_P002 No alias RING-v-class E3 ligase 0.02 Archaeplastida
AT5G62460 No alias RING/FYVE/PHD zinc finger superfamily protein 0.02 LandPlants
GSVIVT01011789001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 LandPlants
LOC_Os01g03100.1 No alias RING-v-class E3 ligase 0.02 LandPlants
LOC_Os11g38800.1 No alias RING-v-class E3 ligase 0.04 LandPlants
Solyc01g010880.3.1 No alias RING-v-class E3 ligase 0.03 LandPlants
Solyc03g116030.4.1 No alias RING-v-class E3 ligase 0.05 LandPlants
Solyc05g007660.2.1 No alias RING-v-class E3 ligase 0.02 LandPlants
Solyc05g008390.3.1 No alias RING-v-class E3 ligase 0.02 LandPlants
Solyc08g014080.4.1 No alias RING-v-class E3 ligase 0.02 LandPlants
Zm00001e021220_P001 No alias RING-v-class E3 ligase 0.04 LandPlants
LOC_Os11g38800.1 No alias RING-v-class E3 ligase 0.02 SeedPlants
Solyc01g010880.3.1 No alias RING-v-class E3 ligase 0.02 SeedPlants
Solyc03g116030.4.1 No alias RING-v-class E3 ligase 0.01 SeedPlants
Solyc05g007660.2.1 No alias RING-v-class E3 ligase 0.02 SeedPlants
Zm00001e021220_P001 No alias RING-v-class E3 ligase 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 81 126
IPR022143 DUF3675 132 250
No external refs found!