AT1G02720 (GATL5)

Aliases : GATL5

Description : galacturonosyltransferase 5

Gene families : OG0000478 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000478_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G02720
Cluster	HCCA: Cluster_35

Target	Alias	Description	ECC score	Gene Family Method
Ala_g10118	GATL7	galacturonosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Als_g49079	GATL7	galacturonosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g00584	GATL7	galacturonosyltransferase & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g15946	GATL7	galacturonosyltransferase & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g09053	GATL7	galacturonosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g03480	GATL7	galacturonosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Gb_09766	GATL3	galacturonosyltransferase	0.04	OrthoFinder output from all 47 species
Msp_g01644	GATL7	galacturonosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g02979	GATL7	galacturonosyltransferase & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g10830	GATL7	galacturonosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g45115	GATL7	galacturonosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g12326	GATL3	galacturonosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005783	endoplasmic reticulum	IDA	Interproscan
CC	GO:0005794	Golgi apparatus	IDA	Interproscan
CC	GO:0005794	Golgi apparatus	ISM	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009664	plant-type cell wall organization	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010191	mucilage metabolic process	None	Extended
BP	GO:0010192	mucilage biosynthetic process	None	Extended
BP	GO:0010393	galacturonan metabolic process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016051	carbohydrate biosynthetic process	ISS	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	ISS	Interproscan
MF	GO:0016758	hexosyltransferase activity	ISS	Interproscan
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0045488	pectin metabolic process	None	Extended
MF	GO:0047262	polygalacturonate 4-alpha-galacturonosyltransferase activity	ISS	Interproscan
BP	GO:0048354	mucilage biosynthetic process involved in seed coat development	IMP	Interproscan
BP	GO:0048359	mucilage metabolic process involved in seed coat development	None	Extended
BP	GO:0048363	mucilage pectin metabolic process	IMP	Interproscan
BP	GO:0070726	cell wall assembly	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071668	plant-type cell wall assembly	IMP	Interproscan
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0006863	purine nucleobase transport	IEP	HCCA
BP	GO:0009696	salicylic acid metabolic process	IEP	HCCA
BP	GO:0015851	nucleobase transport	IEP	HCCA
BP	GO:0018958	phenol-containing compound metabolic process	IEP	HCCA
BP	GO:0042537	benzene-containing compound metabolic process	IEP	HCCA
BP	GO:0045893	positive regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0051254	positive regulation of RNA metabolic process	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA
MF	GO:0080031	methyl salicylate esterase activity	IEP	HCCA
BP	GO:1902680	positive regulation of RNA biosynthetic process	IEP	HCCA
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002495	Glyco_trans_8	82	338

External Links

No external refs found!

AT1G02720 (GATL5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation