AT1G02475


Description : Polyketide cyclase/dehydrase and lipid transport superfamily protein


Gene families : OG0005579 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005579_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G02475
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
Aev_g05143 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21121 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g00913 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14648 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g13297 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.06G032800.1 Ceric.06G032800 not classified & original description: pacid=50620611... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000949.8 No alias No description available 0.04 OrthoFinder output from all 47 species
Cre14.g616250 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g43231 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02126 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os01g22510.1 LOC_Os01g22510 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Lfl_g05206 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26535 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Pir_g40977 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g28606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019820 No alias not classified & original description: CDS=1-657 0.03 OrthoFinder output from all 47 species
Sam_g26213 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g068030.3.1 Solyc01g068030 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006787 porphyrin-containing compound catabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
CC GO:0009368 endopeptidase Clp complex IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009526 plastid envelope IEP HCCA
CC GO:0009528 plastid inner membrane IEP HCCA
CC GO:0009532 plastid stroma IEP HCCA
CC GO:0009534 chloroplast thylakoid IEP HCCA
CC GO:0009535 chloroplast thylakoid membrane IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009543 chloroplast thylakoid lumen IEP HCCA
CC GO:0009570 chloroplast stroma IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
CC GO:0009706 chloroplast inner membrane IEP HCCA
CC GO:0009840 chloroplastic endopeptidase Clp complex IEP HCCA
CC GO:0009941 chloroplast envelope IEP HCCA
BP GO:0010099 regulation of photomorphogenesis IEP HCCA
BP GO:0010100 negative regulation of photomorphogenesis IEP HCCA
BP GO:0010206 photosystem II repair IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0010304 PSII associated light-harvesting complex II catabolic process IEP HCCA
BP GO:0010478 chlororespiration IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015996 chlorophyll catabolic process IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0019757 glycosinolate metabolic process IEP HCCA
BP GO:0019758 glycosinolate biosynthetic process IEP HCCA
BP GO:0019760 glucosinolate metabolic process IEP HCCA
BP GO:0019761 glucosinolate biosynthetic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
BP GO:0030091 protein repair IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031967 organelle envelope IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0031969 chloroplast membrane IEP HCCA
CC GO:0031975 envelope IEP HCCA
CC GO:0031976 plastid thylakoid IEP HCCA
CC GO:0031978 plastid thylakoid lumen IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033015 tetrapyrrole catabolic process IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
CC GO:0042170 plastid membrane IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0042744 hydrogen peroxide catabolic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044550 secondary metabolite biosynthetic process IEP HCCA
BP GO:0046149 pigment catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
CC GO:0055035 plastid thylakoid membrane IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:2000030 regulation of response to red or far red light IEP HCCA
InterPro domains Description Start Stop
IPR005031 COQ10_START 85 212
No external refs found!