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  5. AT1G01200

AT1G01200 (RABA3, ATRAB-A3, ATRABA3)


Aliases : RABA3, ATRAB-A3, ATRABA3

Description : RAB GTPase homolog A3


Gene families : OG0001718 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001718_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G01200

Target Alias Description ECC score Gene Family Method Actions
Ala_g09756 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g41162 ATRABA4C, RABA4C, SMG1 A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0409.g068486 ATRABA4C, RABA4C, SMG1 A-class RAB GTPase & original description: CDS=114-785 0.02 OrthoFinder output from all 47 species
Gb_03447 RABA4D, ATRABA4D A-class RAB GTPase 0.05 OrthoFinder output from all 47 species
Lfl_g28692 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06105 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g00259 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Smo148444 ATRABA4C, RABA4C, SMG1 Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder output from all 47 species
Spa_g38230 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding ISS Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005768 endosome IDA Interproscan
CC GO:0009504 cell plate IDA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0001932 regulation of protein phosphorylation IEP HCCA
BP GO:0001933 negative regulation of protein phosphorylation IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004860 protein kinase inhibitor activity IEP HCCA
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP HCCA
MF GO:0004871 obsolete signal transducer activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006469 negative regulation of protein kinase activity IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006598 polyamine catabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0007088 regulation of mitotic nuclear division IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
BP GO:0007267 cell-cell signaling IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009310 amine catabolic process IEP HCCA
BP GO:0009698 phenylpropanoid metabolic process IEP HCCA
BP GO:0010026 trichome differentiation IEP HCCA
BP GO:0010393 galacturonan metabolic process IEP HCCA
BP GO:0010563 negative regulation of phosphorus metabolic process IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
BP GO:0010948 negative regulation of cell cycle process IEP HCCA
BP GO:0016125 sterol metabolic process IEP HCCA
BP GO:0016126 sterol biosynthetic process IEP HCCA
BP GO:0016128 phytosteroid metabolic process IEP HCCA
BP GO:0016129 phytosteroid biosynthetic process IEP HCCA
BP GO:0016131 brassinosteroid metabolic process IEP HCCA
BP GO:0016132 brassinosteroid biosynthetic process IEP HCCA
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019210 kinase inhibitor activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
BP GO:0023052 signaling IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0031400 negative regulation of protein modification process IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033673 negative regulation of kinase activity IEP HCCA
BP GO:0034406 cell wall beta-glucan metabolic process IEP HCCA
BP GO:0042023 DNA endoreduplication IEP HCCA
BP GO:0042325 regulation of phosphorylation IEP HCCA
BP GO:0042326 negative regulation of phosphorylation IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0042402 cellular biogenic amine catabolic process IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
BP GO:0043549 regulation of kinase activity IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0044786 cell cycle DNA replication IEP HCCA
BP GO:0045488 pectin metabolic process IEP HCCA
BP GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0045786 negative regulation of cell cycle IEP HCCA
BP GO:0045839 negative regulation of mitotic nuclear division IEP HCCA
BP GO:0045859 regulation of protein kinase activity IEP HCCA
BP GO:0045930 negative regulation of mitotic cell cycle IEP HCCA
BP GO:0045936 negative regulation of phosphate metabolic process IEP HCCA
BP GO:0048767 root hair elongation IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
BP GO:0051248 negative regulation of protein metabolic process IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051338 regulation of transferase activity IEP HCCA
BP GO:0051348 negative regulation of transferase activity IEP HCCA
BP GO:0051783 regulation of nuclear division IEP HCCA
BP GO:0051784 negative regulation of nuclear division IEP HCCA
BP GO:0052541 plant-type cell wall cellulose metabolic process IEP HCCA
BP GO:0052546 cell wall pectin metabolic process IEP HCCA
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP HCCA
BP GO:0071901 negative regulation of protein serine/threonine kinase activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP HCCA
BP GO:1904030 negative regulation of cyclin-dependent protein kinase activity IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 30 190
No external refs found!