MA_97947g0010


Description : 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases Pectate lyase family protein


Gene families : OG_01_0000238 (Gene family) Phylogenetic Tree(s): OG0000238_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_97947g0010
Cluster HCCA cluster: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
AT3G07010 No alias Pectin lyase-like superfamily protein 0.02 Gene family
AT5G48900 No alias Pectin lyase-like superfamily protein 0.03 Gene family
AT5G55720 No alias Pectin lyase-like superfamily protein 0.02 Gene family
GSVIVT01003984001 No alias 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
GSVIVT01007582001 No alias 10.6.3 cell wall.degradation.pectate lyases and... 0.03 Gene family
GSVIVT01028548001 No alias 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
LOC_Os04g05050 Os04g0137201 10.6.3 cell wall.degradation.pectate lyases and... 0.03 Gene family
MA_10430145g0030 No alias 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
Solyc01g010740.3.1 Solyc01g010740.3 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
Solyc02g093580.3.1 Solyc02g093580.3 10.6.3 cell wall.degradation.pectate lyases and... 0.03 Gene family
Solyc03g111690.3.1 Solyc03g111690.3 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
Solyc05g055510.3.1 Solyc05g055510.3 10.6.3 cell wall.degradation.pectate lyases and... 0.03 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002022 Pec_lyase 142 327
No external refs found!