AMTR_s00049p00034730 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00049.17

Description : RNA biosynthesis.transcriptional activation.B3 superfamily.LAV-ABI3 transcription factor


Gene families : OG_01_0001110 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001110_tree ,
OG_02_0000678 (LandPlants) Phylogenetic Tree(s): OG_02_0000678_tree ,
OG_03_0000807 (SeedPlants) Phylogenetic Tree(s): OG_03_0000807_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00049p00034730
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01028540001 No alias RNA biosynthesis.transcriptional activation.B3... 0.03 Archaeplastida
MA_66505g0020 No alias transcription factor (LAV-ABI3) 0.02 Archaeplastida
GSVIVT01028540001 No alias RNA biosynthesis.transcriptional activation.B3... 0.02 LandPlants
MA_66505g0020 No alias transcription factor (LAV-ABI3) 0.02 LandPlants
GSVIVT01028540001 No alias RNA biosynthesis.transcriptional activation.B3... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 514 610
No external refs found!