AMTR_s00049p00034730 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00049.17

Description : RNA biosynthesis.transcriptional activation.B3 superfamily.LAV-ABI3 transcription factor

Gene families : OG_01_0001110 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001110_tree ,
OG_02_0000678 (LandPlants) Phylogenetic Tree(s): OG_02_0000678_tree ,
OG_03_0000807 (SeedPlants) Phylogenetic Tree(s): OG_03_0000807_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00049p00034730
Cluster	HCCA: Cluster_160

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01028540001	No alias	RNA biosynthesis.transcriptional activation.B3...	0.03	Archaeplastida
MA_66505g0020	No alias	transcription factor (LAV-ABI3)	0.02	Archaeplastida
GSVIVT01028540001	No alias	RNA biosynthesis.transcriptional activation.B3...	0.02	LandPlants
MA_66505g0020	No alias	transcription factor (LAV-ABI3)	0.02	LandPlants
GSVIVT01028540001	No alias	RNA biosynthesis.transcriptional activation.B3...	0.02	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003340	B3_DNA-bd	514	610

External Links

No external refs found!