Gb_37608


Description : cyclin (CYCD)


Gene families : OG_01_0000252 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000252_tree ,
OG_02_0000382 (LandPlants) Phylogenetic Tree(s): OG_02_0000382_tree ,
OG_03_0000715 (SeedPlants) Phylogenetic Tree(s): OG_03_0000715_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_37608
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00148150 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.11 Archaeplastida
AMTR_s00072p00074880 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.08 Archaeplastida
AMTR_s00190p00017930 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.04 Archaeplastida
AT5G10440 CYCD4;2 cyclin d4;2 0.02 Archaeplastida
AT5G67260 CYCD3;2 CYCLIN D3;2 0.02 Archaeplastida
Cpa|evm.model.tig00021312.11 No alias G2/mitotic-specific cyclin S13-6 OS=Glycine max 0.06 Archaeplastida
GSVIVT01000226001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.06 Archaeplastida
GSVIVT01000451001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 Archaeplastida
GSVIVT01003175001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.04 Archaeplastida
LOC_Os08g37390.1 No alias cyclin (CYCD) 0.04 Archaeplastida
LOC_Os09g29100.1 No alias cyclin (CYCD) 0.02 Archaeplastida
MA_114375g0010 No alias cyclin (CYCD) 0.04 Archaeplastida
Pp3c9_8300V3.1 No alias CYCLIN D1;1 0.05 Archaeplastida
Solyc01g107730.3.1 No alias cyclin (CYCD) 0.01 Archaeplastida
Solyc02g079370.3.1 No alias cyclin (CYCD) 0.03 Archaeplastida
Solyc05g051410.3.1 No alias cyclin (CYCD) 0.01 Archaeplastida
Solyc07g054950.2.1 No alias cyclin (CYCD) 0.04 Archaeplastida
Solyc12g088650.2.1 No alias cyclin (CYCD) 0.03 Archaeplastida
Zm00001e000749_P002 No alias no hits & (original description: none) 0.01 Archaeplastida
Zm00001e003084_P002 No alias cyclin (CYCD) 0.01 Archaeplastida
Zm00001e022508_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e034405_P005 No alias cyclin (CYCD) 0.07 Archaeplastida
AMTR_s00065p00148150 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.1 LandPlants
AMTR_s00190p00017930 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 LandPlants
LOC_Os08g37390.1 No alias cyclin (CYCD) 0.04 LandPlants
LOC_Os09g29100.1 No alias cyclin (CYCD) 0.02 LandPlants
MA_114375g0010 No alias cyclin (CYCD) 0.02 LandPlants
Pp3c9_8300V3.1 No alias CYCLIN D1;1 0.05 LandPlants
Solyc05g051410.3.1 No alias cyclin (CYCD) 0.01 LandPlants
Zm00001e022508_P001 No alias no hits & (original description: none) 0.02 LandPlants
Zm00001e034405_P005 No alias cyclin (CYCD) 0.05 LandPlants
AMTR_s00065p00148150 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.09 SeedPlants
AMTR_s00190p00017930 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.02 SeedPlants
AT5G10440 CYCD4;2 cyclin d4;2 0.01 SeedPlants
LOC_Os08g37390.1 No alias cyclin (CYCD) 0.04 SeedPlants
LOC_Os09g21450.1 No alias cyclin (CYCD) 0.01 SeedPlants
LOC_Os09g29100.1 No alias cyclin (CYCD) 0.02 SeedPlants
MA_114375g0010 No alias cyclin (CYCD) 0.02 SeedPlants
Solyc05g051410.3.1 No alias cyclin (CYCD) 0.01 SeedPlants
Zm00001e022508_P001 No alias no hits & (original description: none) 0.02 SeedPlants
Zm00001e034405_P005 No alias cyclin (CYCD) 0.04 SeedPlants

Type GO Term Name Evidence Source
CC GO:0042025 host cell nucleus IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006671 Cyclin_N 72 199
IPR004367 Cyclin_C-dom 202 300
No external refs found!