AMTR_s00048p00227650 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00048.220

Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL7 component


Gene families : OG_01_0001283 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001283_tree ,
OG_02_0001263 (LandPlants) Phylogenetic Tree(s): OG_02_0001263_tree ,
OG_03_0001139 (SeedPlants) Phylogenetic Tree(s): OG_03_0001139_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00048p00227650
Cluster HCCA: Cluster_267

Target Alias Description ECC score Gene Family Method Actions
AT1G80750 No alias Ribosomal protein L30/L7 family protein 0.03 Archaeplastida
Solyc06g068400.3.1 No alias component RPL7 of LSU proteome component 0.04 Archaeplastida
Solyc07g008370.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
AT1G80750 No alias Ribosomal protein L30/L7 family protein 0.03 LandPlants
MA_171952g0010 No alias component RPL7 of LSU proteome component 0.02 LandPlants
Pp3c11_13640V3.1 No alias Ribosomal protein L30/L7 family protein 0.02 LandPlants
Solyc06g068400.3.1 No alias component RPL7 of LSU proteome component 0.03 LandPlants
Solyc07g008370.4.1 No alias no hits & (original description: none) 0.03 LandPlants
Zm00001e040072_P002 No alias component RPL7 of LSU proteome component 0.02 LandPlants
AT1G80750 No alias Ribosomal protein L30/L7 family protein 0.02 SeedPlants
MA_171952g0010 No alias component RPL7 of LSU proteome component 0.02 SeedPlants
Solyc06g068400.3.1 No alias component RPL7 of LSU proteome component 0.03 SeedPlants
Solyc07g008370.4.1 No alias no hits & (original description: none) 0.03 SeedPlants
Zm00001e040072_P002 No alias component RPL7 of LSU proteome component 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR012988 Ribosomal_L30_N 14 84
IPR016082 Ribosomal_L30_ferredoxin-like 86 137
No external refs found!