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  5. AMTR_s00048p00227650

AMTR_s00048p00227650 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00048.220

Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL7 component


Gene families : OG_01_0001283 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001283_tree ,
OG_02_0001263 (LandPlants) Phylogenetic Tree(s): OG_02_0001263_tree ,
OG_03_0001139 (SeedPlants) Phylogenetic Tree(s): OG_03_0001139_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00048p00227650
Cluster HCCA: Cluster_267

Target Alias Description ECC score Gene Family Method Actions
AT1G80750 No alias Ribosomal protein L30/L7 family protein 0.03 Archaeplastida
Solyc06g068400.3.1 No alias component RPL7 of LSU proteome component 0.04 Archaeplastida
Solyc07g008370.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
AT1G80750 No alias Ribosomal protein L30/L7 family protein 0.03 LandPlants
MA_171952g0010 No alias component RPL7 of LSU proteome component 0.02 LandPlants
Pp3c11_13640V3.1 No alias Ribosomal protein L30/L7 family protein 0.02 LandPlants
Solyc06g068400.3.1 No alias component RPL7 of LSU proteome component 0.03 LandPlants
Solyc07g008370.4.1 No alias no hits & (original description: none) 0.03 LandPlants
Zm00001e040072_P002 No alias component RPL7 of LSU proteome component 0.02 LandPlants
AT1G80750 No alias Ribosomal protein L30/L7 family protein 0.02 SeedPlants
MA_171952g0010 No alias component RPL7 of LSU proteome component 0.02 SeedPlants
Solyc06g068400.3.1 No alias component RPL7 of LSU proteome component 0.03 SeedPlants
Solyc07g008370.4.1 No alias no hits & (original description: none) 0.03 SeedPlants
Zm00001e040072_P002 No alias component RPL7 of LSU proteome component 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR012988 Ribosomal_L30_N 14 84
IPR016082 Ribosomal_L30_ferredoxin-like 86 137
No external refs found!