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  5. MA_96750g0010

MA_96750g0010


Description : 17.3.1.1.2 hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DWF4 Encodes a 22&#945 hydroxylase whose reaction is a rate-limiting step in brassinosteroid biosynthetic pathway. The protein is a member of CYP90B gene family. CLM is an epi-allele with small, compressed rosette, reduced internode length, and reduced fertility, appears in selfed ddm mutant plants possibly due to loss of cytosine methylation. Transcripts accumulate in actively growing tissues, and GUS expression is negatively regulated by brassinosteroids. Localized in the endoplasmic reticulum. The in vitro expressed protein can perform the C-22 hydroxylation of a variety of C27-, C28- and C29-sterols. Cholesterol was the best substrate, followed by campesterol. Sitosterol was a poor substrate. DWARF 4 (DWF4)


Gene families : OG_01_0000009 (Gene family) Phylogenetic Tree(s): OG0000009_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_96750g0010
Cluster HCCA cluster: Cluster_392

Target Alias Description ECC score Gene Family Method Actions
AT1G12740 CYP87A2 cytochrome P450, family 87, subfamily A, polypeptide 2 0.02 Gene family
AT1G55940 CYP708A1 cytochrome P450, family 708, subfamily A, polypeptide 1 0.03 Gene family
AT2G42850 CYP718 cytochrome P450, family 718 0.02 Gene family
AT3G13730 CYP90D1 cytochrome P450, family 90, subfamily D, polypeptide 1 0.04 Gene family
AT3G44970 No alias Cytochrome P450 superfamily protein 0.02 Gene family
AT5G38970 BR6OX, BR6OX1,... brassinosteroid-6-oxidase 1 0.02 Gene family
GSVIVT01018398001 No alias 17.6.1.4 hormone... 0.03 Gene family
GSVIVT01031738001 No alias 26.10 misc.cytochrome P450 Encodes a protein with ABA... 0.03 Gene family
GSVIVT01032230001 No alias 26.10 misc.cytochrome P450 member of CYP716A "cytochrome... 0.04 Gene family
GSVIVT01036885001 No alias 17.1.1.2.1 hormone metabolism.abscisic... 0.04 Gene family
LOC_Os03g45619 Os03g0658800 26.10 misc.cytochrome P450 encodes a protein with... 0.02 Gene family
LOC_Os07g33580 Os07g0519600 26.10 misc.cytochrome P450 member of CYP716A "cytochrome... 0.02 Gene family
MA_110777g0010 No alias 26.10 misc.cytochrome P450 Cytochrome P450 superfamily protein 0.03 Gene family
MA_5775g0010 No alias 17.1.1.2.1 hormone metabolism.abscisic... 0.02 Gene family
Smo89147 PACid_15406971 17.3.1.1.3 hormone... 0.02 Gene family
Solyc02g084740.3.1 Solyc02g084740.3 No description available 0.03 Gene family
Solyc02g085360.3.1 Solyc02g085360.3 17.3.1.1.2 hormone... 0.03 Gene family
Solyc03g121510.3.1 Solyc03g121510.3 No description available 0.03 Gene family
Solyc06g065430.3.1 Solyc06g065430.3 26.10 misc.cytochrome P450 member of CYP716A "cytochrome... 0.02 Gene family
Solyc07g064450.3.1 Solyc07g064450.3 26.10 misc.cytochrome P450 member of CYP716A "cytochrome... 0.03 Gene family
Solyc08g007865.1.1 Solyc08g007865.1 26.10 misc.cytochrome P450 encodes a protein with... 0.02 Gene family
Solyc08g075320.3.1 Solyc08g075320.3 17.1.1.2.1 hormone metabolism.abscisic... 0.04 Gene family
Solyc10g007860.3.1 Solyc10g007860.3 17.6.1.4 hormone... 0.03 Gene family
Zm00001d002626 No alias 26.10 misc.cytochrome P450 encodes a protein with... 0.02 Gene family
Zm00001d013629 GRMZM2G100412 26.10 misc.cytochrome P450 encodes a protein with... 0.03 Gene family
Zm00001d013719 No alias 26.10 misc.cytochrome P450 encodes a protein with... 0.02 Gene family
Zm00001d017762 GRMZM2G179147 17.1.1.2.1 hormone metabolism.abscisic... 0.02 Gene family
Zm00001d026083 GRMZM2G702529 26.10 misc.cytochrome P450 encodes a protein with... 0.03 Gene family
Zm00001d027497 GRMZM2G137380 17.3.1.1.99 hormone... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA InterProScan
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA InterProScan
MF GO:0020037 heme binding IEA InterProScan
BP GO:0055114 oxidation-reduction process IEA InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001128 Cyt_P450 87 499
No external refs found!