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  5. Pnu_g28292

Pnu_g28292 (AMT1;2, ATAMT1;2)


Aliases : AMT1;2, ATAMT1;2

Description : ammonium transporter *(AMT1) & original description: none


Gene families : OG0001233 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001233_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g28292

Target Alias Description ECC score Gene Family Method Actions
AT3G24290 AMT1;5 ammonium transporter 1;5 0.02 OrthoFinder output from all 47 species
Ala_g27462 ATAMT1, AMT1;1, ATAMT1;1 ammonium transporter *(AMT1) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.23G069300.1 AMT1;2,... ammonium transporter *(AMT1) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g03739 AMT1;2, ATAMT1;2 ammonium transporter *(AMT1) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001853001 ATAMT1, AMT1;1, ATAMT1;1 Ammonium transporter 1 member 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Pir_g41331 ATAMT1, AMT1;1, ATAMT1;1 ammonium transporter *(AMT1) & original description: none 0.03 OrthoFinder output from all 47 species
Smo163770 AMT1;3, ATAMT1;3 Solute transport.channels.AMT family.ammonium... 0.04 OrthoFinder output from all 47 species
Zm00001e041215_P001 ATAMT1, AMT1;1,... ammonium transporter (AMT1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008519 ammonium transmembrane transporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0072488 ammonium transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR024041 NH4_transpt_AmtB-like_dom 71 494
No external refs found!