Gb_37075


Description : RNA polymerase-V auxiliary factor (KTF1/SPT5L). component SPT5 of SPT4/5 transcription elongation factor complex


Gene families : OG_01_0001535 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001535_tree ,
OG_02_0002332 (LandPlants) Phylogenetic Tree(s): OG_02_0002332_tree ,
OG_03_0003310 (SeedPlants) Phylogenetic Tree(s): OG_03_0003310_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_37075
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
AT4G08350 GTA02, GTA2 global transcription factor group A2 0.05 Archaeplastida
AT5G04290 SPT5L, KTF1 kow domain-containing transcription factor 1 0.03 Archaeplastida
GSVIVT01010022001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.03 Archaeplastida
GSVIVT01016203001 No alias Chromatin organisation.DNA methylation.canonical... 0.08 Archaeplastida
LOC_Os05g43060.1 No alias RNA polymerase-V auxiliary factor (KTF1/SPT5L) 0.03 Archaeplastida
MA_10434986g0010 No alias RNA polymerase-V auxiliary factor (KTF1/SPT5L).... 0.05 Archaeplastida
Pp3c16_360V3.1 No alias global transcription factor group A2 0.02 Archaeplastida
Pp3c25_8110V3.1 No alias global transcription factor group A2 0.03 Archaeplastida
Solyc04g064700.4.1 No alias component SPT5 of SPT4/5 transcription elongation factor complex 0.02 Archaeplastida
Solyc11g008150.3.1 No alias RNA polymerase-V auxiliary factor (KTF1/SPT5L) 0.03 Archaeplastida
Zm00001e027389_P004 No alias RNA polymerase-V auxiliary factor (KTF1/SPT5L) 0.06 Archaeplastida
Zm00001e032078_P001 No alias RNA polymerase-V auxiliary factor (KTF1/SPT5L) 0.03 Archaeplastida
Zm00001e036210_P001 No alias component SPT5 of SPT4/5 transcription elongation factor complex 0.02 Archaeplastida
AT4G08350 GTA02, GTA2 global transcription factor group A2 0.05 LandPlants
GSVIVT01010022001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.03 LandPlants
MA_10434986g0010 No alias RNA polymerase-V auxiliary factor (KTF1/SPT5L).... 0.04 LandPlants
Pp3c16_360V3.1 No alias global transcription factor group A2 0.02 LandPlants
Pp3c25_8110V3.1 No alias global transcription factor group A2 0.02 LandPlants
AT4G08350 GTA02, GTA2 global transcription factor group A2 0.04 SeedPlants
GSVIVT01010022001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.02 SeedPlants
MA_10434986g0010 No alias RNA polymerase-V auxiliary factor (KTF1/SPT5L).... 0.04 SeedPlants
Solyc04g064700.4.1 No alias component SPT5 of SPT4/5 transcription elongation factor complex 0.01 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005100 NGN-domain 57 141
IPR005824 KOW 357 383
No external refs found!