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  5. AMTR_s00048p00210040

AMTR_s00048p00210040 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00048.187

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG_01_0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_02_0000002 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_03_0000006 (SeedPlants) Phylogenetic Tree(s): OG_03_0000006_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00048p00210040
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AT1G17950 BW52, ATMYB52, MYB52 myb domain protein 52 0.03 Archaeplastida
AT1G74650 ATMYB31, MYB31, ATY13 myb domain protein 31 0.03 Archaeplastida
AT1G79180 ATMYB63, MYB63 myb domain protein 63 0.02 Archaeplastida
AT3G49690 MYB84, RAX3, ATMYB84 myb domain protein 84 0.03 Archaeplastida
AT4G12350 AtMYB42, MYB42 myb domain protein 42 0.04 Archaeplastida
AT4G22680 AtMYB85, MYB85 myb domain protein 85 0.02 Archaeplastida
AT4G33450 ATMYB69, MYB69 myb domain protein 69 0.03 Archaeplastida
Cpa|evm.model.tig00000663.2 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Cre12.g522400 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
Cre16.g677382 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01026868001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01035332001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
LOC_Os01g51260.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os02g02370.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os02g42870.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os04g45060.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os05g46610.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os08g33800.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os11g10130.1 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10433651g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10434028g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_82197g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp2g22560.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp5g19050.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Pp3c17_19947V3.1 No alias myb domain protein 88 0.02 Archaeplastida
Pp3c25_3170V3.1 No alias myb domain protein 16 0.02 Archaeplastida
Pp3c7_23450V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Pp3c9_15975V3.1 No alias myb domain protein 43 0.02 Archaeplastida
Smo6091 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Solyc01g009650.1.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc02g067340.4.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc05g055030.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc06g009710.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g065100.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc12g099140.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e004114_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e015239_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e020044_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e035652_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e037956_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e041239_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
AMTR_s00010p00261750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 LandPlants
AT1G74650 ATMYB31, MYB31, ATY13 myb domain protein 31 0.03 LandPlants
AT3G49690 MYB84, RAX3, ATMYB84 myb domain protein 84 0.02 LandPlants
AT4G05100 AtMYB74, MYB74 myb domain protein 74 0.02 LandPlants
AT4G12350 AtMYB42, MYB42 myb domain protein 42 0.02 LandPlants
AT5G10280 ATMYB64, ATMYB92, MYB92 myb domain protein 92 0.02 LandPlants
GSVIVT01028171001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 LandPlants
GSVIVT01028328001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 LandPlants
Gb_24641 No alias transcription factor (MYB) 0.02 LandPlants
LOC_Os01g07450.1 No alias transcription factor (MYB) 0.02 LandPlants
LOC_Os01g51260.1 No alias transcription factor (MYB) 0.02 LandPlants
LOC_Os02g02370.1 No alias transcription factor (MYB) 0.02 LandPlants
LOC_Os03g04900.1 No alias transcription factor (MYB) 0.02 LandPlants
LOC_Os04g45060.1 No alias transcription factor (MYB) 0.02 LandPlants
LOC_Os05g46610.1 No alias transcription factor (MYB) 0.02 LandPlants
LOC_Os12g07640.1 No alias transcription factor (MYB) 0.02 LandPlants
MA_10434028g0010 No alias transcription factor (MYB) 0.02 LandPlants
Solyc01g010910.2.1 No alias transcription factor (MYB) 0.02 LandPlants
Solyc01g102340.3.1 No alias transcription factor (MYB) 0.02 LandPlants
Solyc02g067340.4.1 No alias transcription factor (MYB) 0.02 LandPlants
Solyc03g119370.2.1 No alias transcription factor (MYB) 0.02 LandPlants
Solyc05g014290.4.1 No alias transcription factor (MYB) 0.02 LandPlants
Solyc05g053330.3.1 No alias transcription factor (MYB) 0.02 LandPlants
Solyc05g055030.2.1 No alias transcription factor (MYB) 0.02 LandPlants
Solyc06g009710.4.1 No alias no hits & (original description: none) 0.03 LandPlants
Solyc06g065100.3.1 No alias transcription factor (MYB) 0.02 LandPlants
Solyc11g072060.3.1 No alias transcription factor (MYB) 0.02 LandPlants
Solyc12g049350.2.1 No alias transcription factor (MYB) 0.02 LandPlants
Solyc12g099140.2.1 No alias transcription factor (MYB) 0.02 LandPlants
Zm00001e007085_P001 No alias transcription factor (MYB) 0.02 LandPlants
Zm00001e015239_P001 No alias transcription factor (MYB) 0.02 LandPlants
Zm00001e019941_P001 No alias transcription factor (MYB) 0.02 LandPlants
Zm00001e026166_P001 No alias transcription factor (MYB) 0.02 LandPlants
Zm00001e037956_P001 No alias transcription factor (MYB) 0.02 LandPlants
Zm00001e041239_P001 No alias transcription factor (MYB) 0.02 LandPlants
AT4G05100 AtMYB74, MYB74 myb domain protein 74 0.02 SeedPlants
LOC_Os05g46610.1 No alias transcription factor (MYB) 0.02 SeedPlants
LOC_Os12g07640.1 No alias transcription factor (MYB) 0.02 SeedPlants
Solyc01g102340.3.1 No alias transcription factor (MYB) 0.02 SeedPlants
Zm00001e041239_P001 No alias transcription factor (MYB) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 61
No external refs found!