Gb_36850


Description : subunit gamma of cargo adaptor F-subcomplex


Gene families : OG_01_0003299 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003299_tree ,
OG_02_0003767 (LandPlants) Phylogenetic Tree(s): OG_02_0003767_tree ,
OG_03_0004588 (SeedPlants) Phylogenetic Tree(s): OG_03_0004588_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_36850
Cluster HCCA: Cluster_240

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00069290 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.08 Archaeplastida
AT4G34450 No alias coatomer gamma-2 subunit, putative / gamma-2 coat... 0.12 Archaeplastida
Cpa|evm.model.tig00020629.20 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 Archaeplastida
Cre06.g310750 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.07 Archaeplastida
GSVIVT01031955001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.1 Archaeplastida
LOC_Os03g12590.1 No alias subunit gamma of cargo adaptor F-subcomplex 0.14 Archaeplastida
LOC_Os07g10150.1 No alias subunit gamma of cargo adaptor F-subcomplex 0.16 Archaeplastida
Mp1g05250.1 No alias subunit gamma of cargo adaptor F-subcomplex 0.13 Archaeplastida
Pp3c16_12310V3.1 No alias coatomer gamma-2 subunit, putative / gamma-2 coat... 0.1 Archaeplastida
Pp3c27_4930V3.1 No alias coatomer gamma-2 subunit, putative / gamma-2 coat... 0.03 Archaeplastida
Smo268757 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.06 Archaeplastida
Solyc01g109540.4.1 No alias subunit gamma of cargo adaptor F-subcomplex 0.1 Archaeplastida
Zm00001e000949_P001 No alias subunit gamma of cargo adaptor F-subcomplex 0.14 Archaeplastida
Zm00001e011398_P002 No alias subunit gamma of cargo adaptor F-subcomplex 0.12 Archaeplastida
Zm00001e033065_P001 No alias subunit gamma of cargo adaptor F-subcomplex 0.14 Archaeplastida
AMTR_s00059p00069290 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.08 LandPlants
AT4G34450 No alias coatomer gamma-2 subunit, putative / gamma-2 coat... 0.11 LandPlants
GSVIVT01031955001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.1 LandPlants
LOC_Os03g12590.1 No alias subunit gamma of cargo adaptor F-subcomplex 0.13 LandPlants
LOC_Os07g10150.1 No alias subunit gamma of cargo adaptor F-subcomplex 0.15 LandPlants
Mp1g05250.1 No alias subunit gamma of cargo adaptor F-subcomplex 0.12 LandPlants
Pp3c16_12310V3.1 No alias coatomer gamma-2 subunit, putative / gamma-2 coat... 0.1 LandPlants
Pp3c27_4930V3.1 No alias coatomer gamma-2 subunit, putative / gamma-2 coat... 0.02 LandPlants
Pp3c5_5240V3.1 No alias coatomer gamma-2 subunit, putative / gamma-2 coat... 0.01 LandPlants
Smo268757 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.05 LandPlants
Solyc01g109540.4.1 No alias subunit gamma of cargo adaptor F-subcomplex 0.1 LandPlants
Zm00001e000949_P001 No alias subunit gamma of cargo adaptor F-subcomplex 0.12 LandPlants
Zm00001e011398_P002 No alias subunit gamma of cargo adaptor F-subcomplex 0.12 LandPlants
Zm00001e033065_P001 No alias subunit gamma of cargo adaptor F-subcomplex 0.13 LandPlants
AMTR_s00059p00069290 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.08 SeedPlants
AT4G34450 No alias coatomer gamma-2 subunit, putative / gamma-2 coat... 0.11 SeedPlants
GSVIVT01031955001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.1 SeedPlants
LOC_Os03g12590.1 No alias subunit gamma of cargo adaptor F-subcomplex 0.13 SeedPlants
LOC_Os07g10150.1 No alias subunit gamma of cargo adaptor F-subcomplex 0.15 SeedPlants
Solyc01g109540.4.1 No alias subunit gamma of cargo adaptor F-subcomplex 0.1 SeedPlants
Zm00001e000949_P001 No alias subunit gamma of cargo adaptor F-subcomplex 0.12 SeedPlants
Zm00001e011398_P002 No alias subunit gamma of cargo adaptor F-subcomplex 0.12 SeedPlants
Zm00001e033065_P001 No alias subunit gamma of cargo adaptor F-subcomplex 0.13 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030117 membrane coat IEA Interproscan
CC GO:0030126 COPI vesicle coat IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002553 Clathrin/coatomer_adapt-like_N 44 162
IPR002553 Clathrin/coatomer_adapt-like_N 195 417
IPR013040 Coatomer_gsu_app_Ig-like_dom 499 620
No external refs found!