Gb_36850

Description : subunit gamma of cargo adaptor F-subcomplex

Gene families : OG_01_0003299 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003299_tree ,
OG_02_0003767 (LandPlants) Phylogenetic Tree(s): OG_02_0003767_tree ,
OG_03_0004588 (SeedPlants) Phylogenetic Tree(s): OG_03_0004588_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_36850
Cluster	HCCA: Cluster_240

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00059p00069290	evm_27.TU.AmTr_v1...	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.08	Archaeplastida
AT4G34450	No alias	coatomer gamma-2 subunit, putative / gamma-2 coat...	0.12	Archaeplastida
Cpa\|evm.model.tig00020629.20	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.03	Archaeplastida
Cre06.g310750	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.07	Archaeplastida
GSVIVT01031955001	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.1	Archaeplastida
LOC_Os03g12590.1	No alias	subunit gamma of cargo adaptor F-subcomplex	0.14	Archaeplastida
LOC_Os07g10150.1	No alias	subunit gamma of cargo adaptor F-subcomplex	0.16	Archaeplastida
Mp1g05250.1	No alias	subunit gamma of cargo adaptor F-subcomplex	0.13	Archaeplastida
Pp3c16_12310V3.1	No alias	coatomer gamma-2 subunit, putative / gamma-2 coat...	0.1	Archaeplastida
Pp3c27_4930V3.1	No alias	coatomer gamma-2 subunit, putative / gamma-2 coat...	0.03	Archaeplastida
Smo268757	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.06	Archaeplastida
Solyc01g109540.4.1	No alias	subunit gamma of cargo adaptor F-subcomplex	0.1	Archaeplastida
Zm00001e000949_P001	No alias	subunit gamma of cargo adaptor F-subcomplex	0.14	Archaeplastida
Zm00001e011398_P002	No alias	subunit gamma of cargo adaptor F-subcomplex	0.12	Archaeplastida
Zm00001e033065_P001	No alias	subunit gamma of cargo adaptor F-subcomplex	0.14	Archaeplastida
AMTR_s00059p00069290	evm_27.TU.AmTr_v1...	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.08	LandPlants
AT4G34450	No alias	coatomer gamma-2 subunit, putative / gamma-2 coat...	0.11	LandPlants
GSVIVT01031955001	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.1	LandPlants
LOC_Os03g12590.1	No alias	subunit gamma of cargo adaptor F-subcomplex	0.13	LandPlants
LOC_Os07g10150.1	No alias	subunit gamma of cargo adaptor F-subcomplex	0.15	LandPlants
Mp1g05250.1	No alias	subunit gamma of cargo adaptor F-subcomplex	0.12	LandPlants
Pp3c16_12310V3.1	No alias	coatomer gamma-2 subunit, putative / gamma-2 coat...	0.1	LandPlants
Pp3c27_4930V3.1	No alias	coatomer gamma-2 subunit, putative / gamma-2 coat...	0.02	LandPlants
Pp3c5_5240V3.1	No alias	coatomer gamma-2 subunit, putative / gamma-2 coat...	0.01	LandPlants
Smo268757	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.05	LandPlants
Solyc01g109540.4.1	No alias	subunit gamma of cargo adaptor F-subcomplex	0.1	LandPlants
Zm00001e000949_P001	No alias	subunit gamma of cargo adaptor F-subcomplex	0.12	LandPlants
Zm00001e011398_P002	No alias	subunit gamma of cargo adaptor F-subcomplex	0.12	LandPlants
Zm00001e033065_P001	No alias	subunit gamma of cargo adaptor F-subcomplex	0.13	LandPlants
AMTR_s00059p00069290	evm_27.TU.AmTr_v1...	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.08	SeedPlants
AT4G34450	No alias	coatomer gamma-2 subunit, putative / gamma-2 coat...	0.11	SeedPlants
GSVIVT01031955001	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.1	SeedPlants
LOC_Os03g12590.1	No alias	subunit gamma of cargo adaptor F-subcomplex	0.13	SeedPlants
LOC_Os07g10150.1	No alias	subunit gamma of cargo adaptor F-subcomplex	0.15	SeedPlants
Solyc01g109540.4.1	No alias	subunit gamma of cargo adaptor F-subcomplex	0.1	SeedPlants
Zm00001e000949_P001	No alias	subunit gamma of cargo adaptor F-subcomplex	0.12	SeedPlants
Zm00001e011398_P002	No alias	subunit gamma of cargo adaptor F-subcomplex	0.12	SeedPlants
Zm00001e033065_P001	No alias	subunit gamma of cargo adaptor F-subcomplex	0.13	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005198	structural molecule activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006820	anion transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015833	peptide transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	Interproscan
CC	GO:0030117	membrane coat	IEA	Interproscan
CC	GO:0030120	vesicle coat	None	Extended
CC	GO:0030126	COPI vesicle coat	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0042886	amide transport	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002553	Clathrin/coatomer_adapt-like_N	44	162
IPR002553	Clathrin/coatomer_adapt-like_N	195	417
IPR013040	Coatomer_gsu_app_Ig-like_dom	499	620

External Links

No external refs found!

Gb_36850

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation