Pnu_g27821

Description : subunit alpha of coat protein complex & original description: none

Gene families : OG0000371 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000371_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pnu_g27821

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00220200	evm_27.TU.AmTr_v1...	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.01	OrthoFinder output from all 39 species
Aev_g07325	No alias	subunit alpha of coat protein complex & original...	0.02	OrthoFinder output from all 39 species
Gb_09624	No alias	subunit alpha of coat protein complex	0.01	OrthoFinder output from all 39 species
MA_10428405g0010	No alias	subunit alpha of coat protein complex	0.01	OrthoFinder output from all 39 species
Mp3g00050.1	No alias	subunit alpha of coat protein complex	0.01	OrthoFinder output from all 39 species
Spa_g25852	No alias	subunit alpha of coat protein complex & original...	0.01	OrthoFinder output from all 39 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005198	structural molecule activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	Interproscan
CC	GO:0030117	membrane coat	None	Extended
CC	GO:0030120	vesicle coat	None	Extended
CC	GO:0030126	COPI vesicle coat	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006720	isoprenoid metabolic process	IEP	HCCA
BP	GO:0006721	terpenoid metabolic process	IEP	HCCA
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	HCCA
BP	GO:0008299	isoprenoid biosynthetic process	IEP	HCCA
BP	GO:0008610	lipid biosynthetic process	IEP	HCCA
MF	GO:0008661	1-deoxy-D-xylulose-5-phosphate synthase activity	IEP	HCCA
BP	GO:0016114	terpenoid biosynthetic process	IEP	HCCA
MF	GO:0016744	transketolase or transaldolase activity	IEP	HCCA
CC	GO:0030127	COPII vesicle coat	IEP	HCCA
MF	GO:0030599	pectinesterase activity	IEP	HCCA
BP	GO:0042545	cell wall modification	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071555	cell wall organization	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001680	WD40_repeat	241	276
IPR001680	WD40_repeat	45	79
IPR001680	WD40_repeat	84	121
IPR001680	WD40_repeat	198	231
IPR001680	WD40_repeat	126	163
IPR006692	Coatomer_WD-assoc_reg	340	764
IPR010714	Coatomer_asu_C	810	1206

External Links

No external refs found!