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  5. Pnu_g27720

Pnu_g27720


Description : calcium sensor *(CML) & original description: none


Gene families : OG0000383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000383_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g27720

Target Alias Description ECC score Gene Family Method Actions
AT2G15680 No alias Calcium-binding EF-hand family protein 0.04 OrthoFinder output from all 47 species
Aev_g34437 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g35874 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g14256 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_03899 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Gb_35180 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Mp2g14930.1 CML23 Probable calcium-binding protein CML23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Ore_g07468 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016987_P001 Zm00001e016987 Probable calcium-binding protein CML16 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 65 125
No external refs found!