AMTR_s00048p00184670 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00048.138

Description : Cell cycle.regulation.cyclins.CYCA-type cyclin


Gene families : OG_01_0000635 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000635_tree ,
OG_02_0000438 (LandPlants) Phylogenetic Tree(s): OG_02_0000438_tree ,
OG_03_0000371 (SeedPlants) Phylogenetic Tree(s): OG_03_0000371_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00048p00184670
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
AT1G44110 CYCA1;1 Cyclin A1;1 0.04 Archaeplastida
GSVIVT01008823001 No alias Cell cycle.regulation.cyclins.CYCA-type cyclin 0.04 Archaeplastida
Gb_07594 No alias cyclin (CYCA) 0.02 Archaeplastida
Gb_10619 No alias cyclin (CYCA) 0.04 Archaeplastida
LOC_Os01g13260.1 No alias cyclin (CYCA) 0.03 Archaeplastida
LOC_Os03g41100.1 No alias cyclin (CYCA) 0.05 Archaeplastida
LOC_Os12g31810.1 No alias cyclin (CYCA) 0.03 Archaeplastida
MA_28323g0010 No alias cyclin (CYCA) 0.02 Archaeplastida
MA_88982g0010 No alias cyclin (CYCA) 0.02 Archaeplastida
Pp3c14_23640V3.1 No alias Cyclin A1;1 0.02 Archaeplastida
Pp3c1_38770V3.1 No alias Cyclin A1;1 0.03 Archaeplastida
Pp3c2_9020V3.1 No alias Cyclin A1;1 0.02 Archaeplastida
Smo442428 No alias Cell cycle.regulation.cyclins.CYCA-type cyclin 0.04 Archaeplastida
Smo97411 No alias Cell cycle.regulation.cyclins.CYCA-type cyclin 0.03 Archaeplastida
Solyc04g078310.3.1 No alias cyclin (CYCA) 0.06 Archaeplastida
Solyc11g005090.2.1 No alias cyclin (CYCA) 0.03 Archaeplastida
Zm00001e017335_P001 No alias cyclin (CYCA) 0.03 Archaeplastida
Zm00001e026125_P002 No alias cyclin (CYCA) 0.02 Archaeplastida
AT1G44110 CYCA1;1 Cyclin A1;1 0.03 LandPlants
GSVIVT01008823001 No alias Cell cycle.regulation.cyclins.CYCA-type cyclin 0.03 LandPlants
Gb_10619 No alias cyclin (CYCA) 0.03 LandPlants
LOC_Os03g41100.1 No alias cyclin (CYCA) 0.04 LandPlants
LOC_Os12g31810.1 No alias cyclin (CYCA) 0.02 LandPlants
Mp2g25500.1 No alias cyclin (CYCA) 0.01 LandPlants
Pp3c1_38770V3.1 No alias Cyclin A1;1 0.02 LandPlants
Pp3c2_8700V3.1 No alias Cyclin A1;1 0.01 LandPlants
Pp3c2_9020V3.1 No alias Cyclin A1;1 0.02 LandPlants
Smo442428 No alias Cell cycle.regulation.cyclins.CYCA-type cyclin 0.02 LandPlants
Smo97411 No alias Cell cycle.regulation.cyclins.CYCA-type cyclin 0.02 LandPlants
Solyc04g078310.3.1 No alias cyclin (CYCA) 0.04 LandPlants
Solyc11g005090.2.1 No alias cyclin (CYCA) 0.02 LandPlants
Zm00001e005138_P001 No alias cyclin (CYCA) 0.02 LandPlants
Zm00001e017335_P001 No alias cyclin (CYCA) 0.02 LandPlants
Zm00001e026125_P002 No alias cyclin (CYCA) 0.02 LandPlants
AT1G44110 CYCA1;1 Cyclin A1;1 0.02 SeedPlants
AT5G43080 CYCA3;1 Cyclin A3;1 0.02 SeedPlants
GSVIVT01008823001 No alias Cell cycle.regulation.cyclins.CYCA-type cyclin 0.03 SeedPlants
Gb_10619 No alias cyclin (CYCA) 0.02 SeedPlants
LOC_Os03g41100.1 No alias cyclin (CYCA) 0.02 SeedPlants
LOC_Os12g39210.1 No alias cyclin (CYCA) 0.01 SeedPlants
Solyc04g078310.3.1 No alias cyclin (CYCA) 0.02 SeedPlants
Solyc11g005090.2.1 No alias cyclin (CYCA) 0.02 SeedPlants
Zm00001e005138_P001 No alias cyclin (CYCA) 0.02 SeedPlants
Zm00001e026125_P002 No alias cyclin (CYCA) 0.02 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004367 Cyclin_C-dom 419 534
IPR006671 Cyclin_N 290 417
No external refs found!