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  5. Pnu_g27621

Pnu_g27621 (VLN4, ATVLN4)


Aliases : VLN4, ATVLN4

Description : villin actin-crosslinking factor & original description: none


Gene families : OG0000479 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000479_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g27621

Target Alias Description ECC score Gene Family Method Actions
AT4G30160 VLN4, ATVLN4 villin 4 0.02 OrthoFinder output from all 47 species
Ceric.28G019500.1 VLN4, ATVLN4,... villin actin-crosslinking factor & original description:... 0.03 OrthoFinder output from all 47 species
GSVIVT01024752001 VLN1, ATVLN1 Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
Gb_23115 VLN4, ATVLN4 villin actin-crosslinking factor 0.03 OrthoFinder output from all 47 species
LOC_Os06g44890.1 VLN4, ATVLN4,... villin actin-crosslinking factor 0.02 OrthoFinder output from all 47 species
MA_10436386g0010 ATVLN2, VLN2 villin actin-crosslinking factor 0.05 OrthoFinder output from all 47 species
Ppi_g04677 ATVLN2, VLN2 villin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0076.g017480 VLN4, ATVLN4 villin actin-crosslinking factor & original description:... 0.03 OrthoFinder output from all 47 species
Zm00001e001712_P002 ATVLN2, VLN2,... villin actin-crosslinking factor 0.03 OrthoFinder output from all 47 species
Zm00001e007033_P001 VLN4, ATVLN4,... villin actin-crosslinking factor 0.03 OrthoFinder output from all 47 species
Zm00001e038175_P001 ATVLN2, VLN2,... villin actin-crosslinking factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
BP GO:0007010 cytoskeleton organization IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
InterPro domains Description Start Stop
IPR003128 Villin_headpiece 967 1002
IPR007123 Gelsolin-like_dom 267 338
IPR007123 Gelsolin-like_dom 39 111
IPR007123 Gelsolin-like_dom 153 207
IPR007123 Gelsolin-like_dom 628 665
IPR007123 Gelsolin-like_dom 407 483
No external refs found!