1. Home
  2. Species
  3. Psilotum nudum
  4. Sequence
  5. Pnu_g27605

Pnu_g27605


Description : not classified & original description: none


Gene families : OG0000018 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000018_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g27605

Target Alias Description ECC score Gene Family Method Actions
MA_101084g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.01 OrthoFinder output from all 39 species
MA_114722g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.01 OrthoFinder output from all 39 species
MA_35889g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.01 OrthoFinder output from all 39 species
MA_38266g0010 CRR22 RNA editing factor (MEF19). RNA editing factor (OTP82) 0.02 OrthoFinder output from all 39 species
MA_9741g0010 CRR2 Pentatricopeptide repeat-containing protein At4g02750... 0.01 OrthoFinder output from all 39 species
Pnu_g15319 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 39 species
Pnu_g16657 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR046848 E_motif 20 82
IPR032867 DYW_dom 118 210
IPR046849 Eplus_motif 87 112
No external refs found!