Description : No description available
Gene families : OG_01_0000001 (Gene family) Phylogenetic Tree(s): OG0000001_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR network (cutoff 100): MA_953793g0020 | |
Cluster | HCCA cluster: Cluster_231 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G11290 | CRR22 | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Gene family | |
AT1G18485 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Gene family | |
AT3G57430 | OTP84 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Gene family | |
AT3G63370 | OTP86 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Gene family | |
GSVIVT01009407001 | No alias | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.02 | Gene family | |
GSVIVT01017075001 | No alias | No description available | 0.02 | Gene family | |
GSVIVT01038381001 | No alias | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.03 | Gene family | |
LOC_Os01g10800 | Os01g0205200 | No description available | 0.04 | Gene family | |
LOC_Os04g39410 | Os04g0469400 | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.01 | Gene family | |
LOC_Os04g41120 | Os04g0488200 | No description available | 0.02 | Gene family | |
LOC_Os05g50950 | Os05g0586900 | No description available | 0.02 | Gene family | |
MA_10427342g0010 | No alias | No description available | 0.02 | Gene family | |
MA_105629g0010 | No alias | 35.1.27 not assigned.no ontology.tetratricopeptide... | 0.02 | Gene family | |
MA_16823g0010 | No alias | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.02 | Gene family | |
MA_4438g0010 | No alias | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.02 | Gene family | |
MA_525914g0010 | No alias | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.02 | Gene family | |
MA_8868720g0010 | No alias | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.02 | Gene family | |
Smo105356 | PACid_15414251 | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.03 | Gene family | |
Smo92008 | PACid_15415329 | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.02 | Gene family | |
Smo99756 | PACid_15418911 | No description available | 0.02 | Gene family | |
Solyc01g007850.2.1 | Solyc01g007850.2 | No description available | 0.02 | Gene family | |
Solyc02g081900.3.1 | Solyc02g081900.3 | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.02 | Gene family | |
Solyc03g111210.3.1 | Solyc03g111210.3 | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.02 | Gene family | |
Solyc07g008480.2.1 | Solyc07g008480.2 | No description available | 0.02 | Gene family | |
Solyc11g008940.1.1 | Solyc11g008940.1 | No description available | 0.02 | Gene family | |
Solyc11g066920.1.1 | Solyc11g066920.1 | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.05 | Gene family | |
Zm00001d020825 | GRMZM5G851929 | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.02 | Gene family | |
Zm00001d031535 | GRMZM2G076257 | No description available | 0.02 | Gene family | |
Zm00001d032185 | GRMZM2G161368 | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.02 | Gene family |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 289 | 310 |
IPR002885 | Pentatricopeptide_repeat | 390 | 415 |
IPR002885 | Pentatricopeptide_repeat | 591 | 614 |
IPR002885 | Pentatricopeptide_repeat | 315 | 362 |
IPR002885 | Pentatricopeptide_repeat | 515 | 562 |
IPR002885 | Pentatricopeptide_repeat | 416 | 461 |
IPR002885 | Pentatricopeptide_repeat | 110 | 160 |
IPR002885 | Pentatricopeptide_repeat | 214 | 262 |
No external refs found! |