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  5. Pnu_g27450

Pnu_g27450 (PTAC8, TMP14, PSI-P, PSAP)


Aliases : PTAC8, TMP14, PSI-P, PSAP

Description : regulatory factor *(CURT) of thylakoid grana stacking & original description: none


Gene families : OG0000444 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000444_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g27450
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
AT1G52220 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.02 OrthoFinder output from all 47 species
AT2G46820 PTAC8, TMP14, PSI-P, PSAP photosystem I P subunit 0.02 OrthoFinder output from all 47 species
AT4G01150 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
Adi_g075200 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Adi_g075201 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Aev_g30164 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Ala_g00864 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Aob_g02852 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene69285.t1 Aspi01Gene69285 regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Azfi_s0335.g065535 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Cba_g02293 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Ceric.05G101400.1 Ceric.05G101400 regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Ceric.18G031800.1 Ceric.18G031800 regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000849.28 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g10196 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Dcu_g41769 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Ehy_g19545 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Ehy_g25382 PTAC8, TMP14, PSI-P, PSAP regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Ehy_g28043 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
GSVIVT01028749001 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.03 OrthoFinder output from all 47 species
LOC_Os01g55570.1 LOC_Os01g55570 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g15400.1 LOC_Os06g15400 Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.03 OrthoFinder output from all 47 species
MA_60075g0010 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.04 OrthoFinder output from all 47 species
MA_734271g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_904218g0010 PTAC8, TMP14, PSI-P, PSAP no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g25670.1 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.02 OrthoFinder output from all 47 species
Mp6g20800.1 PTAC8, TMP14, PSI-P, PSAP Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.02 OrthoFinder output from all 47 species
Msp_g05299 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Msp_g40930 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Pir_g00176 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Pir_g64873 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Ppi_g18345 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Solyc01g095430.3.1 Solyc01g095430 Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.02 OrthoFinder output from all 47 species
Spa_g06785 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Tin_g05372 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Zm00001e002212_P002 PTAC8, TMP14,... Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.02 OrthoFinder output from all 47 species
Zm00001e023473_P001 Zm00001e023473 Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.03 OrthoFinder output from all 47 species
Zm00001e029009_P001 Zm00001e029009 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e030948_P002 Zm00001e030948 Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.02 OrthoFinder output from all 47 species
Zm00001e034870_P002 PTAC8, TMP14,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR025564 CAAD_dom 137 220
No external refs found!