Pnu_g27212


Description : not classified & original description: none


Gene families : OG0000481 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000481_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g27212

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00027690 evm_27.TU.AmTr_v1... 11S globulin seed storage protein 2 OS=Sesamum indicum 0.06 OrthoFinder output from all 47 species
Als_g04891 No alias Globulin-type seed storage protein *(CR) & original... 0.02 OrthoFinder output from all 47 species
Aop_g17109 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g29046 CRU3, CRC Globulin-type seed storage protein *(CR) & original... 0.05 OrthoFinder output from all 47 species
Aop_g67915 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g69361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70635 No alias Globulin-type seed storage protein *(CR) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene34023.t1 Aspi01Gene34023 Globulin-type seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0007.g011190 No alias Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g011191 CRU2, CRB Globulin-type seed storage protein *(CR) & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0007.g011215 No alias Globulin-type seed storage protein *(CR) & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0010.g012318 No alias Globulin-type seed storage protein & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0045.g029739 CRU3, CRC Globulin-type seed storage protein *(CR) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0078.g038308 No alias Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0104.g044758 No alias Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0152.g053400 No alias Globulin-type seed storage protein *(CR) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0152.g053408 No alias Globulin-type seed storage protein *(CR) & original... 0.04 OrthoFinder output from all 47 species
Ceric.06G051600.1 Ceric.06G051600 Globulin-type seed storage protein & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01028337001 CRU1, CRA1, ATCRA1 11S globulin subunit beta OS=Cucurbita maxima 0.02 OrthoFinder output from all 47 species
GSVIVT01028338001 CRU3, CRC 11S globulin subunit beta OS=Cucurbita maxima 0.02 OrthoFinder output from all 47 species
Gb_01530 CRU2, CRB no description available(sp|a0a222nnm9|cos1_cocnu : 359.0) 0.05 OrthoFinder output from all 47 species
Gb_12801 No alias no description available(sp|a0a222nnm9|cos1_cocnu : 216.0) 0.04 OrthoFinder output from all 47 species
Gb_14134 No alias no description available(sp|a0a222nnm9|cos1_cocnu : 216.0) 0.04 OrthoFinder output from all 47 species
Gb_18954 No alias no description available(sp|a0a222nnm9|cos1_cocnu : 172.0) 0.04 OrthoFinder output from all 47 species
Gb_26254 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_26731 No alias no description available(sp|a0a222nnm9|cos1_cocnu : 216.0) 0.04 OrthoFinder output from all 47 species
Gb_26733 No alias no description available(sp|a0a222nnm9|cos1_cocnu : 139.0) 0.05 OrthoFinder output from all 47 species
Gb_30214 CRU1, CRA1, ATCRA1 no description available(sp|a0a1l6k371|jugn4_jugni : 301.0) 0.06 OrthoFinder output from all 47 species
Gb_34863 CRU2, CRB no description available(sp|a0a222nnm9|cos1_cocnu : 352.0) 0.06 OrthoFinder output from all 47 species
Gb_41467 No alias no description available(sp|a0a222nnm9|cos1_cocnu : 82.0) 0.02 OrthoFinder output from all 47 species
LOC_Os08g03410.1 CRU1, CRA1,... no description available(sp|a0a222nnm9|cos1_cocnu : 326.0) 0.02 OrthoFinder output from all 47 species
LOC_Os09g37976.1 LOC_Os09g37976 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g07654 No alias Globulin-type seed storage protein *(CR) & original... 0.04 OrthoFinder output from all 47 species
Len_g37579 No alias Globulin-type seed storage protein *(CR) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g05973 No alias Globulin-type seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11734 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25699 CRU2, CRB not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32032 No alias Globulin-type seed storage protein *(CR) & original... 0.04 OrthoFinder output from all 47 species
Mp1g18470.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g16700 CRU2, CRB Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species
Msp_g20774 No alias Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species
Msp_g44561 No alias Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species
Ore_g04135 CRU3, CRC not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g15802 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g21695 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g40299 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g43216 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g43224 No alias Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species
Pir_g15974 No alias Globulin-type seed storage protein *(CR) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g25554 No alias Globulin-type seed storage protein *(CR) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000987 No alias not classified & original description: CDS=48-1502 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001159 No alias Globulin-type seed storage protein & original... 0.02 OrthoFinder output from all 47 species
Smo87987 No alias Legumin B OS=Gossypium hirsutum 0.05 OrthoFinder output from all 47 species
Solyc01g094110.3.1 Solyc01g094110 13S globulin seed storage protein 2 OS=Fagopyrum... 0.04 OrthoFinder output from all 47 species
Solyc01g104100.3.1 Solyc01g104100 no description available(sp|a0a222nnm9|cos1_cocnu : 83.2) 0.02 OrthoFinder output from all 47 species
Tin_g18476 CRU2, CRB Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e027621_P002 Zm00001e027621 Glutelin type-D 1 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003896 DNA primase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004451 isocitrate lyase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016833 oxo-acid-lyase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR006045 Cupin_1 62 170
IPR006045 Cupin_1 253 396
No external refs found!