AMTR_s00048p00143150 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00048.91

Description : Solute transport.channels.OSCA calcium-permeable channel


Gene families : OG_01_0000175 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000175_tree ,
OG_02_0001075 (LandPlants) Phylogenetic Tree(s): OG_02_0001075_tree ,
OG_03_0000936 (SeedPlants) Phylogenetic Tree(s): OG_03_0000936_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00048p00143150
Cluster HCCA: Cluster_250

Target Alias Description ECC score Gene Family Method Actions
AT1G11960 No alias ERD (early-responsive to dehydration stress) family protein 0.03 Archaeplastida
AT1G32090 No alias early-responsive to dehydration stress protein (ERD4) 0.06 Archaeplastida
GSVIVT01021562001 No alias Solute transport.channels.OSCA calcium-permeable channel 0.03 Archaeplastida
LOC_Os01g72210.1 No alias calcium-permeable channel (OSCA) 0.02 Archaeplastida
LOC_Os05g51630.1 No alias calcium-permeable channel (OSCA) 0.02 Archaeplastida
LOC_Os12g39320.1 No alias calcium-permeable channel (OSCA) 0.05 Archaeplastida
MA_10431698g0010 No alias calcium-permeable channel (OSCA) 0.03 Archaeplastida
MA_125601g0010 No alias calcium-permeable channel (OSCA) 0.02 Archaeplastida
Pp3c1_33380V3.1 No alias ERD (early-responsive to dehydration stress) family protein 0.03 Archaeplastida
Pp3c6_25510V3.1 No alias Early-responsive to dehydration stress protein (ERD4) 0.02 Archaeplastida
Solyc02g036260.4.1 No alias calcium-permeable channel (OSCA) 0.06 Archaeplastida
Solyc08g076310.3.1 No alias calcium-permeable channel (OSCA) 0.04 Archaeplastida
AT1G11960 No alias ERD (early-responsive to dehydration stress) family protein 0.03 LandPlants
AT1G32090 No alias early-responsive to dehydration stress protein (ERD4) 0.06 LandPlants
Solyc02g036260.4.1 No alias calcium-permeable channel (OSCA) 0.06 LandPlants
Solyc08g076310.3.1 No alias calcium-permeable channel (OSCA) 0.04 LandPlants
AT1G32090 No alias early-responsive to dehydration stress protein (ERD4) 0.03 SeedPlants
Solyc02g036260.4.1 No alias calcium-permeable channel (OSCA) 0.05 SeedPlants
Solyc08g076310.3.1 No alias calcium-permeable channel (OSCA) 0.02 SeedPlants
Zm00001e020766_P002 No alias calcium-permeable channel (OSCA) 0.02 SeedPlants

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003864 RSN1_7TM 322 645
No external refs found!