AMTR_s00048p00118270 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00048.61

Description : Vesicle trafficking.endomembrane trafficking.protein recycling.ubiquitylated cargo adaptors.TOM associated protein

Gene families : OG_01_0000369 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000369_tree ,
OG_02_0003400 (LandPlants) Phylogenetic Tree(s): OG_02_0003400_tree ,
OG_03_0004543 (SeedPlants) Phylogenetic Tree(s): OG_03_0004543_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00048p00118270
Cluster	HCCA: Cluster_232

Target	Alias	Description	ECC score	Gene Family Method
AT5G16880	No alias	Target of Myb protein 1	0.03	Archaeplastida
LOC_Os05g39760.1	No alias	TOM endomembrane trafficking associated protein	0.03	Archaeplastida
LOC_Os06g22650.1	No alias	TOM endomembrane trafficking associated protein	0.02	Archaeplastida
LOC_Os08g01740.1	No alias	TOM endomembrane trafficking associated protein	0.02	Archaeplastida
LOC_Os10g42724.1	No alias	TOM endomembrane trafficking associated protein	0.03	Archaeplastida
Solyc03g097070.3.1	No alias	TOM endomembrane trafficking associated protein	0.02	Archaeplastida
Solyc04g063280.3.1	No alias	TOM endomembrane trafficking associated protein	0.03	Archaeplastida
AT5G16880	No alias	Target of Myb protein 1	0.03	LandPlants
Gb_11104	No alias	TOM endomembrane trafficking associated protein	0.02	LandPlants
LOC_Os10g42724.1	No alias	TOM endomembrane trafficking associated protein	0.03	LandPlants
AT5G16880	No alias	Target of Myb protein 1	0.03	SeedPlants
LOC_Os10g42724.1	No alias	TOM endomembrane trafficking associated protein	0.03	SeedPlants
Solyc03g097070.3.1	No alias	TOM endomembrane trafficking associated protein	0.01	SeedPlants

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006820	anion transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015833	peptide transport	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0042886	amide transport	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002014	VHS_dom	47	180
IPR004152	GAT_dom	236	319

External Links

No external refs found!