Aliases : TCP13, TFPD, PTF1
Description : TCP-type transcription factor & original description: none
Gene families : OG0000529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000529_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Pnu_g26727 | |
Cluster | HCCA: Cluster_68 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00007p00041830 | TCP10,... | RNA biosynthesis.transcriptional activation.TCP... | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00154p00072430 | TCP13, TFPD,... | RNA biosynthesis.transcriptional activation.TCP... | 0.03 | OrthoFinder output from all 47 species | |
AT1G53230 | TCP3 | TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 | 0.04 | OrthoFinder output from all 47 species | |
AT3G02150 | TCP13, TFPD, PTF1 | plastid transcription factor 1 | 0.03 | OrthoFinder output from all 47 species | |
AT3G18550 | BRC1, ATTCP18, TCP18 | TCP family transcription factor | 0.04 | OrthoFinder output from all 47 species | |
Aev_g07745 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g18510 | ATTCP24, TCP24 | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ala_g18903 | TCP3 | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g28173 | TCP2 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene02917.t2 | TCP3, Aspi01Gene02917 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene50266.t1 | TCP2, Aspi01Gene50266 | TCP-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Cba_g37950 | TCP13, TFPD, PTF1 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.37G069500.1 | TCP2, Ceric.37G069500 | TCP-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g11506 | ATTCP24, TCP24 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01008234001 | TCP12, BRC2 | RNA biosynthesis.transcriptional activation.TCP... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01011962001 | TCP12, BRC2 | RNA biosynthesis.transcriptional activation.TCP... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01036449001 | TCP1 | RNA biosynthesis.transcriptional activation.TCP... | 0.03 | OrthoFinder output from all 47 species | |
Gb_30049 | TCP2 | transcription factor (TCP) | 0.04 | OrthoFinder output from all 47 species | |
Gb_37187 | TCP3 | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g55750.1 | TCP5, LOC_Os01g55750 | transcription factor (TCP) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os03g49880.1 | TCP12, BRC2,... | transcription factor (TCP) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os03g57190.1 | ATTCP24, TCP24,... | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os08g33530.1 | BRC1, ATTCP18,... | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os09g24480.1 | BRC1, ATTCP18,... | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
Len_g03300 | TCP2 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_101752g0020 | ATTCP24, TCP24 | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
MA_3891g0010 | TCP13, TFPD, PTF1 | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
MA_52440g0010 | TCP4, MEE35 | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
MA_547683g0010 | TCP2 | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
Mp1g19590.1 | TCP3 | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
Msp_g48155 | TCP3 | TCP-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g10533 | ATTCP24, TCP24 | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g26630 | TCP2 | TCP-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g02212 | TCP3 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g016414.1.1 | TCP10, Solyc01g016414 | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g077250.2.1 | TCP4, MEE35,... | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g089020.2.1 | TCP13, TFPD,... | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
Solyc03g115010.3.1 | TCP5, Solyc03g115010 | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
Solyc04g006980.1.1 | TCP12, BRC2,... | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
Solyc05g009900.3.1 | TCP12, BRC2,... | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
Solyc06g069460.3.1 | TCP5, Solyc06g069460 | transcription factor (TCP) | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e019734_P001 | TCP5, Zm00001e019734 | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR017887 | TF_TCP_subgr | 307 | 387 |
No external refs found! |