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  5. Gb_35467

Gb_35467


Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 638.0)


Gene families : OG_01_0008686 (Archaeplastida) Phylogenetic Tree(s): OG_01_0008686_tree ,
OG_02_0056817 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_03_0049759 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_35467
Cluster HCCA: Cluster_283

Target Alias Description ECC score Gene Family Method Actions
Gb_16072 No alias RNA editing factor (OTP82) 0.06 Archaeplastida
MA_129805g0010 No alias Pentatricopeptide repeat-containing protein At4g39530... 0.05 Archaeplastida
MA_130999g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.08 Archaeplastida
MA_137736g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.08 Archaeplastida
MA_820066g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032867 DYW_dom 630 754
IPR002885 Pentatricopeptide_repeat 265 292
IPR002885 Pentatricopeptide_repeat 206 231
IPR002885 Pentatricopeptide_repeat 327 353
IPR002885 Pentatricopeptide_repeat 429 456
IPR002885 Pentatricopeptide_repeat 234 260
IPR002885 Pentatricopeptide_repeat 531 555
IPR002885 Pentatricopeptide_repeat 293 322
IPR002885 Pentatricopeptide_repeat 134 181
IPR002885 Pentatricopeptide_repeat 457 505
IPR002885 Pentatricopeptide_repeat 355 403
No external refs found!