Aliases : ATPUB17, PUB17
Description : E3 ubiquitin ligase & original description: none
Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00006p00267930 | evm_27.TU.AmTr_v1... | U-box domain-containing protein 19 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00063p00200790 | evm_27.TU.AmTr_v1... | U-box domain-containing protein 11 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00153p00035720 | ATPUB17, PUB17,... | U-box domain-containing protein 1 OS=Medicago truncatula | 0.02 | OrthoFinder output from all 47 species | |
AT1G08315 | No alias | ARM repeat superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
AT5G01830 | No alias | ARM repeat superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
Aev_g07263 | PUB13, ATPUB13 | E3 ubiquitin ligase *(PUB15) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Als_g07750 | PUB14, ATPUB14 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0011.g012763 | PUB12, AtPUB12 | not classified & original description: CDS=1-549 | 0.08 | OrthoFinder output from all 47 species | |
Azfi_s0070.g036784 | PUB13, ATPUB13 | not classified & original description: CDS=1-531 | 0.05 | OrthoFinder output from all 47 species | |
Dac_g13651 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dac_g32706 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01018389001 | No alias | No description available | 0.04 | OrthoFinder output from all 47 species | |
MA_365628g0010 | No alias | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
MA_468267g0010 | PUB9, ATPUB9 | U-box domain-containing protein 13 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
Msp_g01498 | PUB14, ATPUB14 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g19002 | PUB13, ATPUB13 | E3 ubiquitin ligase *(PUB15) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g32554 | PUB12, AtPUB12 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g34477 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g42410 | ATPUB17, PUB17 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g11319 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pp3c10_4480V3.1 | ATPUB17, PUB17,... | plant U-box 13 | 0.01 | OrthoFinder output from all 47 species | |
Solyc01g096460.2.1 | Solyc01g096460 | U-box domain-containing protein 4 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Solyc04g007640.3.1 | Solyc04g007640 | E3 ubiquitin ligase (PUB) | 0.04 | OrthoFinder output from all 47 species | |
Solyc05g008230.3.1 | Solyc05g008230 | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e010671_P001 | Zm00001e010671 | U-box domain-containing protein 4 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e035415_P001 | Zm00001e035415 | U-box domain-containing protein 4 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004842 | ubiquitin-protein transferase activity | IEA | Interproscan |
BP | GO:0016567 | protein ubiquitination | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005509 | calcium ion binding | IEP | HCCA |
BP | GO:0009719 | response to endogenous stimulus | IEP | HCCA |
BP | GO:0009725 | response to hormone | IEP | HCCA |
BP | GO:0009733 | response to auxin | IEP | HCCA |
BP | GO:0010033 | response to organic substance | IEP | HCCA |
BP | GO:0042221 | response to chemical | IEP | HCCA |
MF | GO:0043169 | cation binding | IEP | HCCA |
MF | GO:0046872 | metal ion binding | IEP | HCCA |
BP | GO:0050896 | response to stimulus | IEP | HCCA |
No external refs found! |