Cpa|evm.model.tig00020531.53


Description : 27.1.2 RNA.processing.RNA helicase embryo defective 3011 (EMB3011)


Gene families : OG_01_0000259 (Gene family) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Cpa|evm.model.tig00020531.53
Cluster HCCA cluster: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
AT3G26560 No alias ATP-dependent RNA helicase, putative 0.03 Gene family
Cre07.g349100 No alias 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.01 Gene family
GSVIVT01007911001 No alias 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.01 Gene family
GSVIVT01029863001 No alias 27.1 RNA.processing ATP-dependent RNA helicase, putative 0.01 Gene family
LOC_Os07g32430 Os07g0508000 27.1.2 RNA.processing.RNA helicase embryo defective 3011... 0.01 Gene family
Smo76120 PACid_15413436 No description available 0.01 Gene family
Solyc10g076910.2.1 Solyc10g076910.2 27.1.2 RNA.processing.RNA helicase embryo defective 3011... 0.01 Gene family
Solyc12g089010.2.1 Solyc12g089010.2 27.1.2 RNA.processing.RNA helicase embryo defective 3011... 0.01 Gene family
Zm00001d011963 GRMZM2G300375 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.01 Gene family
Zm00001d045147 GRMZM2G000371,... 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.01 Gene family
Zm00001d049980 GRMZM2G121776 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.01 Gene family

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011709 DUF1605 996 1074
IPR011545 DEAD/DEAH_box_helicase_dom 493 645
IPR001650 Helicase_C 692 783
IPR007502 Helicase-assoc_dom 853 938
No external refs found!