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  5. Pnu_g26309

Pnu_g26309


Description : not classified & original description: none


Gene families : OG0003786 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003786_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g26309
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00143270 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT4G19460 No alias UDP-Glycosyltransferase superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g020279 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene50076.t1 Aspi01Gene50076 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G032300.1 Ceric.08G032300 not classified & original description: pacid=50638429... 0.03 OrthoFinder output from all 47 species
GSVIVT01036920001 No alias No description available 0.04 OrthoFinder output from all 47 species
Len_g18370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_58772g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc12g056050.1.1 Solyc12g056050 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e020295_P001 Zm00001e020295 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005337 nucleoside transmembrane transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0015858 nucleoside transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
BP GO:1901642 nucleoside transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR028098 Glyco_trans_4-like_N 107 287
No external refs found!