Description : not classified & original description: none
Gene families : OG0001265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001265_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Pnu_g26126 | |
Cluster | HCCA: Cluster_29 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aev_g02287 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.31G061400.1 | Ceric.31G061400 | not classified & original description: pacid=50575101... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.39G011900.1 | Ceric.39G011900 | not classified & original description: pacid=50583491... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g02839 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g12133 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g10217 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ore_g16481 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ore_g16482 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g13534 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Sam_g06999 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc02g090910.3.1 | Solyc02g090910 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g16749 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Spa_g22004 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
MF | GO:0004478 | methionine adenosyltransferase activity | IEP | HCCA |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
MF | GO:0005092 | GDP-dissociation inhibitor activity | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0006556 | S-adenosylmethionine biosynthetic process | IEP | HCCA |
BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
BP | GO:0007264 | small GTPase mediated signal transduction | IEP | HCCA |
BP | GO:0008380 | RNA splicing | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
MF | GO:0016624 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | IEP | HCCA |
MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | HCCA |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
MF | GO:0019842 | vitamin binding | IEP | HCCA |
MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | HCCA |
MF | GO:0030695 | GTPase regulator activity | IEP | HCCA |
MF | GO:0030976 | thiamine pyrophosphate binding | IEP | HCCA |
BP | GO:0035556 | intracellular signal transduction | IEP | HCCA |
BP | GO:0044272 | sulfur compound biosynthetic process | IEP | HCCA |
BP | GO:0046500 | S-adenosylmethionine metabolic process | IEP | HCCA |
CC | GO:0046540 | U4/U6 x U5 tri-snRNP complex | IEP | HCCA |
MF | GO:0050997 | quaternary ammonium group binding | IEP | HCCA |
MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | HCCA |
MF | GO:0061630 | ubiquitin protein ligase activity | IEP | HCCA |
MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | HCCA |
CC | GO:0097525 | spliceosomal snRNP complex | IEP | HCCA |
CC | GO:0097526 | spliceosomal tri-snRNP complex | IEP | HCCA |
CC | GO:0120114 | Sm-like protein family complex | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
MF | GO:0140677 | molecular function activator activity | IEP | HCCA |
MF | GO:1901681 | sulfur compound binding | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No external refs found! |