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  5. Pnu_g25935

Pnu_g25935 (SPL10)


Aliases : SPL10

Description : SBP-type transcription factor & original description: none


Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g25935

Target Alias Description ECC score Gene Family Method Actions
Aop_g13089 SPL3 SBP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene14484.t1 SPL3, Aspi01Gene14484 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0068.g036283 AtSPL9, SPL9 SBP-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Cba_g24520 SPL3 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.20G077800.1 SPL3, Ceric.20G077800 SBP-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ehy_g03805 No alias SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g03947 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g52626 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g15344 SPL7, ATSPL7 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020524 SPL2 SBP-type transcription factor & original description: CDS=1-1641 0.02 OrthoFinder output from all 47 species
Solyc10g078700.3.1 AtSPL9, SPL9,... transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Tin_g32347 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 311 384
No external refs found!