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  5. Pnu_g25860

Pnu_g25860 (AtRCD1, RCD1, ATP8, CEO1, CEO)


Aliases : AtRCD1, RCD1, ATP8, CEO1, CEO

Description : organellar-signalling mediator *(RCD1) & original description: none


Gene families : OG0000733 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000733_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g25860

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00059840 AtRCD1, RCD1,... Probable inactive poly [ADP-ribose] polymerase SRO1... 0.02 OrthoFinder output from all 47 species
AT1G23550 SRO2 similar to RCD one 2 0.04 OrthoFinder output from all 47 species
AT2G35510 SRO1 similar to RCD one 1 0.02 OrthoFinder output from all 47 species
AT3G47720 SRO4 similar to RCD one 4 0.02 OrthoFinder output from all 47 species
AT5G62520 SRO5 similar to RCD one 5 0.02 OrthoFinder output from all 47 species
Ala_g14528 AtRCD1, RCD1,... organellar-signalling mediator *(RCD1) & original... 0.03 OrthoFinder output from all 47 species
Aop_g13526 SRO1 organellar-signalling mediator *(RCD1) & original... 0.03 OrthoFinder output from all 47 species
Cba_g10442 No alias organellar-signalling mediator *(RCD1) & original... 0.02 OrthoFinder output from all 47 species
Ceric.15G016700.1 AtRCD1, RCD1,... organellar-signalling mediator *(RCD1) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g02762 AtRCD1, RCD1,... organellar-signalling mediator *(RCD1) & original... 0.02 OrthoFinder output from all 47 species
Gb_33339 SRO1 Probable inactive poly [ADP-ribose] polymerase SRO1... 0.03 OrthoFinder output from all 47 species
LOC_Os03g12820.1 SRO2, LOC_Os03g12820 Probable inactive poly [ADP-ribose] polymerase SRO2... 0.02 OrthoFinder output from all 47 species
Ppi_g31243 SRO1 organellar-signalling mediator *(RCD1) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
InterPro domains Description Start Stop
IPR012317 Poly(ADP-ribose)pol_cat_dom 327 420
IPR022003 RST 542 607
IPR004170 WWE-dom 103 159
No external refs found!