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  5. Pnu_g25845

Pnu_g25845 (DBE1, ATISA2, BE2, ISA2)


Aliases : DBE1, ATISA2, BE2, ISA2

Description : component *(ISA2) of ISA1-ISA2 isoamylase heterodimer & original description: none


Gene families : OG0001139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001139_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g25845
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00156p00067780 DBE1, ATISA2,... Carbohydrate metabolism.starch... 0.03 OrthoFinder output from all 47 species
Aspi01Gene19694.t1 DBE1, ATISA2,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g33014 ATISA1, ISA1 component *(ISA1) of ISA1-ISA2 isoamylase heterodimer &... 0.03 OrthoFinder output from all 47 species
Dcu_g42205 ATISA1, ISA1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05436 ATISA3, ISA3 starch-debranching isoamylase *(ISA3) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g12989 ATISA1, ISA1 component *(ISA1) of ISA1-ISA2 isoamylase heterodimer &... 0.03 OrthoFinder output from all 47 species
Ppi_g01297 ATISA1, ISA1 component *(ISA1) of ISA1-ISA2 isoamylase heterodimer &... 0.02 OrthoFinder output from all 47 species
Sam_g08066 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR004193 Glyco_hydro_13_N 280 372
IPR006047 Glyco_hydro_13_cat_dom 441 549
No external refs found!